Gene : Medtr1g089290 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19847 - WD40 REPEAT PROTEIN Description:  transducin/WD-like repeat-protein
Genomic Order:  4946 Name:  ? Medtr1g089290
Secondary Identifier:  ? PAC:31095785
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g089290 0.5kb upstream 0.5kb upstream 6210 true chr1: 40075569-40081778 Medicago truncatula
Medtr1g089290 0.5kb upstream 0.5kb upstream 500 false chr1: 40075569-40076068 Medicago truncatula
Medtr1g089290 0.5kb downstream 0.5kb downstream 6210 true chr1: 40076069-40082278 Medicago truncatula
Medtr1g089290 0.5kb downstream 0.5kb downstream 500 false chr1: 40081779-40082278 Medicago truncatula
Medtr1g089290 1.0kb upstream 1.0kb upstream 6710 true chr1: 40075069-40081778 Medicago truncatula
Medtr1g089290 1.0kb upstream 1.0kb upstream 1000 false chr1: 40075069-40076068 Medicago truncatula
Medtr1g089290 1.0kb downstream 1.0kb downstream 6710 true chr1: 40076069-40082778 Medicago truncatula
Medtr1g089290 1.0kb downstream 1.0kb downstream 1000 false chr1: 40081779-40082778 Medicago truncatula
Medtr1g089290 2.0kb upstream 2.0kb upstream 7710 true chr1: 40074069-40081778 Medicago truncatula
Medtr1g089290 2.0kb upstream 2.0kb upstream 2000 false chr1: 40074069-40076068 Medicago truncatula
Medtr1g089290 2.0kb downstream 2.0kb downstream 7710 true chr1: 40076069-40083778 Medicago truncatula
Medtr1g089290 2.0kb downstream 2.0kb downstream 2000 false chr1: 40081779-40083778 Medicago truncatula
Medtr1g089290 5.0kb upstream 5.0kb upstream 10710 true chr1: 40071069-40081778 Medicago truncatula
Medtr1g089290 5.0kb upstream 5.0kb upstream 5000 false chr1: 40071069-40076068 Medicago truncatula
Medtr1g089290 5.0kb downstream 5.0kb downstream 10710 true chr1: 40076069-40086778 Medicago truncatula
Medtr1g089290 5.0kb downstream 5.0kb downstream 5000 false chr1: 40081779-40086778 Medicago truncatula
Medtr1g089290 10.0kb upstream 10.0kb upstream 15710 true chr1: 40066069-40081778 Medicago truncatula
Medtr1g089290 10.0kb upstream 10.0kb upstream 10000 false chr1: 40066069-40076068 Medicago truncatula
Medtr1g089290 10.0kb downstream 10.0kb downstream 15710 true chr1: 40076069-40091778 Medicago truncatula
Medtr1g089290 10.0kb downstream 10.0kb downstream 10000 false chr1: 40081779-40091778 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300148 5265 Fabidae View MSA
124065420 5270 Rosid View MSA
123742519 5271 Pentapetalae View MSA
122785957 5272 Eudicot View MSA
122047753 5273 Angiosperm View MSA
121344393 5274 Embryophyte View MSA
123427446 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.087        
cufflinks 4.582        
cufflinks 8.622       High
cufflinks 1.245       Low
cufflinks 7.767       High
cufflinks 1.101       Low
cufflinks 2.118        
cufflinks 6.33        
cufflinks 2.296        

0 Strain