Gene : Medtr1g089110 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Description:  breast carcinoma amplified sequence 3 protein
Genomic Order:  4951 Name:  ? Medtr1g089110
Secondary Identifier:  ? PAC:31097738
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g089110 0.5kb upstream 0.5kb upstream 6303 true chr1: 40103141-40109443 Medicago truncatula
Medtr1g089110 0.5kb upstream 0.5kb upstream 500 false chr1: 40108944-40109443 Medicago truncatula
Medtr1g089110 0.5kb downstream 0.5kb downstream 6303 true chr1: 40102641-40108943 Medicago truncatula
Medtr1g089110 0.5kb downstream 0.5kb downstream 500 false chr1: 40102641-40103140 Medicago truncatula
Medtr1g089110 1.0kb upstream 1.0kb upstream 6803 true chr1: 40103141-40109943 Medicago truncatula
Medtr1g089110 1.0kb upstream 1.0kb upstream 1000 false chr1: 40108944-40109943 Medicago truncatula
Medtr1g089110 1.0kb downstream 1.0kb downstream 6803 true chr1: 40102141-40108943 Medicago truncatula
Medtr1g089110 1.0kb downstream 1.0kb downstream 1000 false chr1: 40102141-40103140 Medicago truncatula
Medtr1g089110 2.0kb upstream 2.0kb upstream 7803 true chr1: 40103141-40110943 Medicago truncatula
Medtr1g089110 2.0kb upstream 2.0kb upstream 2000 false chr1: 40108944-40110943 Medicago truncatula
Medtr1g089110 2.0kb downstream 2.0kb downstream 7803 true chr1: 40101141-40108943 Medicago truncatula
Medtr1g089110 2.0kb downstream 2.0kb downstream 2000 false chr1: 40101141-40103140 Medicago truncatula
Medtr1g089110 5.0kb upstream 5.0kb upstream 10803 true chr1: 40103141-40113943 Medicago truncatula
Medtr1g089110 5.0kb upstream 5.0kb upstream 5000 false chr1: 40108944-40113943 Medicago truncatula
Medtr1g089110 5.0kb downstream 5.0kb downstream 10803 true chr1: 40098141-40108943 Medicago truncatula
Medtr1g089110 5.0kb downstream 5.0kb downstream 5000 false chr1: 40098141-40103140 Medicago truncatula
Medtr1g089110 10.0kb upstream 10.0kb upstream 15803 true chr1: 40103141-40118943 Medicago truncatula
Medtr1g089110 10.0kb upstream 10.0kb upstream 10000 false chr1: 40108944-40118943 Medicago truncatula
Medtr1g089110 10.0kb downstream 10.0kb downstream 15803 true chr1: 40093141-40108943 Medicago truncatula
Medtr1g089110 10.0kb downstream 10.0kb downstream 10000 false chr1: 40093141-40103140 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305395 5265 Fabidae View MSA
124066220 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.804        
cufflinks 5.212        
cufflinks 5.202        
cufflinks 2.032       Low
cufflinks 4.233        
cufflinks 1.22       Low
cufflinks 3.787        
cufflinks 4.685        
cufflinks 4.469        

0 Strain