Gene : Medtr1g088980 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC Description:  DegP protease
Genomic Order:  4929 Name:  ? Medtr1g088980
Secondary Identifier:  ? PAC:31094606
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g088980 0.5kb upstream 0.5kb upstream 9460 true chr1: 39960538-39969997 Medicago truncatula
Medtr1g088980 0.5kb upstream 0.5kb upstream 500 false chr1: 39969498-39969997 Medicago truncatula
Medtr1g088980 0.5kb downstream 0.5kb downstream 9460 true chr1: 39960038-39969497 Medicago truncatula
Medtr1g088980 0.5kb downstream 0.5kb downstream 500 false chr1: 39960038-39960537 Medicago truncatula
Medtr1g088980 1.0kb upstream 1.0kb upstream 9960 true chr1: 39960538-39970497 Medicago truncatula
Medtr1g088980 1.0kb upstream 1.0kb upstream 1000 false chr1: 39969498-39970497 Medicago truncatula
Medtr1g088980 1.0kb downstream 1.0kb downstream 9960 true chr1: 39959538-39969497 Medicago truncatula
Medtr1g088980 1.0kb downstream 1.0kb downstream 1000 false chr1: 39959538-39960537 Medicago truncatula
Medtr1g088980 2.0kb upstream 2.0kb upstream 10960 true chr1: 39960538-39971497 Medicago truncatula
Medtr1g088980 2.0kb upstream 2.0kb upstream 2000 false chr1: 39969498-39971497 Medicago truncatula
Medtr1g088980 2.0kb downstream 2.0kb downstream 10960 true chr1: 39958538-39969497 Medicago truncatula
Medtr1g088980 2.0kb downstream 2.0kb downstream 2000 false chr1: 39958538-39960537 Medicago truncatula
Medtr1g088980 5.0kb upstream 5.0kb upstream 13960 true chr1: 39960538-39974497 Medicago truncatula
Medtr1g088980 5.0kb upstream 5.0kb upstream 5000 false chr1: 39969498-39974497 Medicago truncatula
Medtr1g088980 5.0kb downstream 5.0kb downstream 13960 true chr1: 39955538-39969497 Medicago truncatula
Medtr1g088980 5.0kb downstream 5.0kb downstream 5000 false chr1: 39955538-39960537 Medicago truncatula
Medtr1g088980 10.0kb upstream 10.0kb upstream 18960 true chr1: 39960538-39979497 Medicago truncatula
Medtr1g088980 10.0kb upstream 10.0kb upstream 10000 false chr1: 39969498-39979497 Medicago truncatula
Medtr1g088980 10.0kb downstream 10.0kb downstream 18960 true chr1: 39950538-39969497 Medicago truncatula
Medtr1g088980 10.0kb downstream 10.0kb downstream 10000 false chr1: 39950538-39960537 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304511 5265 Fabidae View MSA
124069438 5270 Rosid View MSA
123746300 5271 Pentapetalae View MSA
122793106 5272 Eudicot View MSA
122044524 5273 Angiosperm View MSA
123429293 5275 Viridiplantae View MSA
121310306 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178        
cufflinks 2.429        
cufflinks 2.563        
cufflinks 0.172        
cufflinks 4.205       High
cufflinks 0.068     Low Low
cufflinks 0.136        
cufflinks 3.683       High
cufflinks 0.118        

0 Strain