Gene : Medtr1g090340 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  5006
Name:  ? Medtr1g090340 Secondary Identifier:  ? PAC:31092954
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090340 0.5kb upstream 0.5kb upstream 9664 true chr1: 40474454-40484117 Medicago truncatula
Medtr1g090340 0.5kb upstream 0.5kb upstream 500 false chr1: 40474454-40474953 Medicago truncatula
Medtr1g090340 0.5kb downstream 0.5kb downstream 9664 true chr1: 40474954-40484617 Medicago truncatula
Medtr1g090340 0.5kb downstream 0.5kb downstream 500 false chr1: 40484118-40484617 Medicago truncatula
Medtr1g090340 1.0kb upstream 1.0kb upstream 10164 true chr1: 40473954-40484117 Medicago truncatula
Medtr1g090340 1.0kb upstream 1.0kb upstream 1000 false chr1: 40473954-40474953 Medicago truncatula
Medtr1g090340 1.0kb downstream 1.0kb downstream 10164 true chr1: 40474954-40485117 Medicago truncatula
Medtr1g090340 1.0kb downstream 1.0kb downstream 1000 false chr1: 40484118-40485117 Medicago truncatula
Medtr1g090340 2.0kb upstream 2.0kb upstream 11164 true chr1: 40472954-40484117 Medicago truncatula
Medtr1g090340 2.0kb upstream 2.0kb upstream 2000 false chr1: 40472954-40474953 Medicago truncatula
Medtr1g090340 2.0kb downstream 2.0kb downstream 11164 true chr1: 40474954-40486117 Medicago truncatula
Medtr1g090340 2.0kb downstream 2.0kb downstream 2000 false chr1: 40484118-40486117 Medicago truncatula
Medtr1g090340 5.0kb upstream 5.0kb upstream 14164 true chr1: 40469954-40484117 Medicago truncatula
Medtr1g090340 5.0kb upstream 5.0kb upstream 5000 false chr1: 40469954-40474953 Medicago truncatula
Medtr1g090340 5.0kb downstream 5.0kb downstream 14164 true chr1: 40474954-40489117 Medicago truncatula
Medtr1g090340 5.0kb downstream 5.0kb downstream 5000 false chr1: 40484118-40489117 Medicago truncatula
Medtr1g090340 10.0kb upstream 10.0kb upstream 19164 true chr1: 40464954-40484117 Medicago truncatula
Medtr1g090340 10.0kb upstream 10.0kb upstream 10000 false chr1: 40464954-40474953 Medicago truncatula
Medtr1g090340 10.0kb downstream 10.0kb downstream 19164 true chr1: 40474954-40494117 Medicago truncatula
Medtr1g090340 10.0kb downstream 10.0kb downstream 10000 false chr1: 40484118-40494117 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309159 5265 Fabidae View MSA
124068519 5270 Rosid View MSA
123739177 5271 Pentapetalae View MSA
122788918 5272 Eudicot View MSA
122044360 5273 Angiosperm View MSA
121349905 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.373        
cufflinks 6.345        
cufflinks 7.983        
cufflinks 5.155        
cufflinks 7.929        
cufflinks 2.7       Low
cufflinks 7.849        
cufflinks 6.38        
cufflinks 6.294        

0 Strain