Gene : Medtr1g090300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13697:SF33 - 6-PHOSPHOFRUCTOKINASE 4, CHLOROPLASTIC Description:  6-phosphofructokinase
Genomic Order:  5002 Name:  ? Medtr1g090300
Secondary Identifier:  ? PAC:31094827
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ANAEROFRUCAT-PWY Medicago truncatula pathologic  
Mtruncatula ANAGLYCOLYSIS-PWY Medicago truncatula pathologic  
Mtruncatula PWY-1042 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090300 0.5kb upstream 0.5kb upstream 8347 true chr1: 40445894-40454240 Medicago truncatula
Medtr1g090300 0.5kb upstream 0.5kb upstream 500 false chr1: 40453741-40454240 Medicago truncatula
Medtr1g090300 0.5kb downstream 0.5kb downstream 8347 true chr1: 40445394-40453740 Medicago truncatula
Medtr1g090300 0.5kb downstream 0.5kb downstream 500 false chr1: 40445394-40445893 Medicago truncatula
Medtr1g090300 1.0kb upstream 1.0kb upstream 8847 true chr1: 40445894-40454740 Medicago truncatula
Medtr1g090300 1.0kb upstream 1.0kb upstream 1000 false chr1: 40453741-40454740 Medicago truncatula
Medtr1g090300 1.0kb downstream 1.0kb downstream 8847 true chr1: 40444894-40453740 Medicago truncatula
Medtr1g090300 1.0kb downstream 1.0kb downstream 1000 false chr1: 40444894-40445893 Medicago truncatula
Medtr1g090300 2.0kb upstream 2.0kb upstream 9847 true chr1: 40445894-40455740 Medicago truncatula
Medtr1g090300 2.0kb upstream 2.0kb upstream 2000 false chr1: 40453741-40455740 Medicago truncatula
Medtr1g090300 2.0kb downstream 2.0kb downstream 9847 true chr1: 40443894-40453740 Medicago truncatula
Medtr1g090300 2.0kb downstream 2.0kb downstream 2000 false chr1: 40443894-40445893 Medicago truncatula
Medtr1g090300 5.0kb upstream 5.0kb upstream 12847 true chr1: 40445894-40458740 Medicago truncatula
Medtr1g090300 5.0kb upstream 5.0kb upstream 5000 false chr1: 40453741-40458740 Medicago truncatula
Medtr1g090300 5.0kb downstream 5.0kb downstream 12847 true chr1: 40440894-40453740 Medicago truncatula
Medtr1g090300 5.0kb downstream 5.0kb downstream 5000 false chr1: 40440894-40445893 Medicago truncatula
Medtr1g090300 10.0kb upstream 10.0kb upstream 17847 true chr1: 40445894-40463740 Medicago truncatula
Medtr1g090300 10.0kb upstream 10.0kb upstream 10000 false chr1: 40453741-40463740 Medicago truncatula
Medtr1g090300 10.0kb downstream 10.0kb downstream 17847 true chr1: 40435894-40453740 Medicago truncatula
Medtr1g090300 10.0kb downstream 10.0kb downstream 10000 false chr1: 40435894-40445893 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306462 5265 Fabidae View MSA
124067240 5270 Rosid View MSA
123738988 5271 Pentapetalae View MSA
122769940 5272 Eudicot View MSA
122042097 5273 Angiosperm View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.701        
cufflinks 1.332        
cufflinks 1.841        
cufflinks 0.544        
cufflinks 2.056       High
cufflinks 0.332       Low
cufflinks 0.937        
cufflinks 1.288        
cufflinks 0.489       Low

0 Strain