Gene : Medtr1g090687 M. truncatula Mt4.0v1
Defline:  (1 of 5) PF04578 - Protein of unknown function, DUF594 (DUF594) Description:  DUF594 family protein
Genomic Order:  5038 Name:  ? Medtr1g090687
Secondary Identifier:  ? PAC:31098242
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090687 0.5kb upstream 0.5kb upstream 2735 true chr1: 40652214-40654948 Medicago truncatula
Medtr1g090687 0.5kb upstream 0.5kb upstream 500 false chr1: 40654449-40654948 Medicago truncatula
Medtr1g090687 0.5kb downstream 0.5kb downstream 2735 true chr1: 40651714-40654448 Medicago truncatula
Medtr1g090687 0.5kb downstream 0.5kb downstream 500 false chr1: 40651714-40652213 Medicago truncatula
Medtr1g090687 1.0kb upstream 1.0kb upstream 3235 true chr1: 40652214-40655448 Medicago truncatula
Medtr1g090687 1.0kb upstream 1.0kb upstream 1000 false chr1: 40654449-40655448 Medicago truncatula
Medtr1g090687 1.0kb downstream 1.0kb downstream 3235 true chr1: 40651214-40654448 Medicago truncatula
Medtr1g090687 1.0kb downstream 1.0kb downstream 1000 false chr1: 40651214-40652213 Medicago truncatula
Medtr1g090687 2.0kb upstream 2.0kb upstream 4235 true chr1: 40652214-40656448 Medicago truncatula
Medtr1g090687 2.0kb upstream 2.0kb upstream 2000 false chr1: 40654449-40656448 Medicago truncatula
Medtr1g090687 2.0kb downstream 2.0kb downstream 4235 true chr1: 40650214-40654448 Medicago truncatula
Medtr1g090687 2.0kb downstream 2.0kb downstream 2000 false chr1: 40650214-40652213 Medicago truncatula
Medtr1g090687 5.0kb upstream 5.0kb upstream 7235 true chr1: 40652214-40659448 Medicago truncatula
Medtr1g090687 5.0kb upstream 5.0kb upstream 5000 false chr1: 40654449-40659448 Medicago truncatula
Medtr1g090687 5.0kb downstream 5.0kb downstream 7235 true chr1: 40647214-40654448 Medicago truncatula
Medtr1g090687 5.0kb downstream 5.0kb downstream 5000 false chr1: 40647214-40652213 Medicago truncatula
Medtr1g090687 10.0kb upstream 10.0kb upstream 12235 true chr1: 40652214-40664448 Medicago truncatula
Medtr1g090687 10.0kb upstream 10.0kb upstream 10000 false chr1: 40654449-40664448 Medicago truncatula
Medtr1g090687 10.0kb downstream 10.0kb downstream 12235 true chr1: 40642214-40654448 Medicago truncatula
Medtr1g090687 10.0kb downstream 10.0kb downstream 10000 false chr1: 40642214-40652213 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122314211 5265 Fabidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.89        
cufflinks 7.738        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.053        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.988       Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain