Gene : Medtr1g090657 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR34373:SF2 - SHUGOSHIN C TERMINUS Description:  shugoshin protein
Genomic Order:  5031 Name:  ? Medtr1g090657
Secondary Identifier:  ? PAC:31092848
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090657 0.5kb upstream 0.5kb upstream 3530 true chr1: 40596843-40600372 Medicago truncatula
Medtr1g090657 0.5kb upstream 0.5kb upstream 500 false chr1: 40596843-40597342 Medicago truncatula
Medtr1g090657 0.5kb downstream 0.5kb downstream 3530 true chr1: 40597343-40600872 Medicago truncatula
Medtr1g090657 0.5kb downstream 0.5kb downstream 500 false chr1: 40600373-40600872 Medicago truncatula
Medtr1g090657 1.0kb upstream 1.0kb upstream 4030 true chr1: 40596343-40600372 Medicago truncatula
Medtr1g090657 1.0kb upstream 1.0kb upstream 1000 false chr1: 40596343-40597342 Medicago truncatula
Medtr1g090657 1.0kb downstream 1.0kb downstream 4030 true chr1: 40597343-40601372 Medicago truncatula
Medtr1g090657 1.0kb downstream 1.0kb downstream 1000 false chr1: 40600373-40601372 Medicago truncatula
Medtr1g090657 2.0kb upstream 2.0kb upstream 5030 true chr1: 40595343-40600372 Medicago truncatula
Medtr1g090657 2.0kb upstream 2.0kb upstream 2000 false chr1: 40595343-40597342 Medicago truncatula
Medtr1g090657 2.0kb downstream 2.0kb downstream 5030 true chr1: 40597343-40602372 Medicago truncatula
Medtr1g090657 2.0kb downstream 2.0kb downstream 2000 false chr1: 40600373-40602372 Medicago truncatula
Medtr1g090657 5.0kb upstream 5.0kb upstream 8030 true chr1: 40592343-40600372 Medicago truncatula
Medtr1g090657 5.0kb upstream 5.0kb upstream 5000 false chr1: 40592343-40597342 Medicago truncatula
Medtr1g090657 5.0kb downstream 5.0kb downstream 8030 true chr1: 40597343-40605372 Medicago truncatula
Medtr1g090657 5.0kb downstream 5.0kb downstream 5000 false chr1: 40600373-40605372 Medicago truncatula
Medtr1g090657 10.0kb upstream 10.0kb upstream 13030 true chr1: 40587343-40600372 Medicago truncatula
Medtr1g090657 10.0kb upstream 10.0kb upstream 10000 false chr1: 40587343-40597342 Medicago truncatula
Medtr1g090657 10.0kb downstream 10.0kb downstream 13030 true chr1: 40597343-40610372 Medicago truncatula
Medtr1g090657 10.0kb downstream 10.0kb downstream 10000 false chr1: 40600373-40610372 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122306201 5265 Fabidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.103        
cufflinks 0.55        
cufflinks 0.477       Low
cufflinks 1.159        
cufflinks 0.628        
cufflinks 0.92        
cufflinks 1.332       High
cufflinks 0.366       Low
cufflinks 1.378       High

0 Strain