Gene : Medtr1g090520 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR27000:SF185 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PEPR1-RELATED Description:  LRR receptor-like kinase family protein
Genomic Order:  5019 Name:  ? Medtr1g090520
Secondary Identifier:  ? PAC:31100277
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090520 0.5kb upstream 0.5kb upstream 4380 true chr1: 40538674-40543053 Medicago truncatula
Medtr1g090520 0.5kb upstream 0.5kb upstream 500 false chr1: 40538674-40539173 Medicago truncatula
Medtr1g090520 0.5kb downstream 0.5kb downstream 4380 true chr1: 40539174-40543553 Medicago truncatula
Medtr1g090520 0.5kb downstream 0.5kb downstream 500 false chr1: 40543054-40543553 Medicago truncatula
Medtr1g090520 1.0kb upstream 1.0kb upstream 4880 true chr1: 40538174-40543053 Medicago truncatula
Medtr1g090520 1.0kb upstream 1.0kb upstream 1000 false chr1: 40538174-40539173 Medicago truncatula
Medtr1g090520 1.0kb downstream 1.0kb downstream 4880 true chr1: 40539174-40544053 Medicago truncatula
Medtr1g090520 1.0kb downstream 1.0kb downstream 1000 false chr1: 40543054-40544053 Medicago truncatula
Medtr1g090520 2.0kb upstream 2.0kb upstream 5880 true chr1: 40537174-40543053 Medicago truncatula
Medtr1g090520 2.0kb upstream 2.0kb upstream 2000 false chr1: 40537174-40539173 Medicago truncatula
Medtr1g090520 2.0kb downstream 2.0kb downstream 5880 true chr1: 40539174-40545053 Medicago truncatula
Medtr1g090520 2.0kb downstream 2.0kb downstream 2000 false chr1: 40543054-40545053 Medicago truncatula
Medtr1g090520 5.0kb upstream 5.0kb upstream 8880 true chr1: 40534174-40543053 Medicago truncatula
Medtr1g090520 5.0kb upstream 5.0kb upstream 5000 false chr1: 40534174-40539173 Medicago truncatula
Medtr1g090520 5.0kb downstream 5.0kb downstream 8880 true chr1: 40539174-40548053 Medicago truncatula
Medtr1g090520 5.0kb downstream 5.0kb downstream 5000 false chr1: 40543054-40548053 Medicago truncatula
Medtr1g090520 10.0kb upstream 10.0kb upstream 13880 true chr1: 40529174-40543053 Medicago truncatula
Medtr1g090520 10.0kb upstream 10.0kb upstream 10000 false chr1: 40529174-40539173 Medicago truncatula
Medtr1g090520 10.0kb downstream 10.0kb downstream 13880 true chr1: 40539174-40553053 Medicago truncatula
Medtr1g090520 10.0kb downstream 10.0kb downstream 10000 false chr1: 40543054-40553053 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122788329 5272 Eudicot View MSA
122297468 5265 Fabidae View MSA
124066125 5270 Rosid View MSA
123746657 5271 Pentapetalae View MSA
122046482 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.486     High High
cufflinks 2.54       Low
cufflinks 5.22        
cufflinks 10.434     High  
cufflinks 2.471       Low
cufflinks 26.456     High  
cufflinks 32.92     High High
cufflinks 3.665        
cufflinks 12.155     High  

0 Strain