Gene : Medtr1g090853 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR34568:SF2 - DNA BINDING PROTEIN Description:  DNA-binding protein PD2
Genomic Order:  5074 Name:  ? Medtr1g090853
Secondary Identifier:  ? PAC:31094369
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090853 0.5kb upstream 0.5kb upstream 4107 true chr1: 40903300-40907406 Medicago truncatula
Medtr1g090853 0.5kb upstream 0.5kb upstream 500 false chr1: 40906907-40907406 Medicago truncatula
Medtr1g090853 0.5kb downstream 0.5kb downstream 4107 true chr1: 40902800-40906906 Medicago truncatula
Medtr1g090853 0.5kb downstream 0.5kb downstream 500 false chr1: 40902800-40903299 Medicago truncatula
Medtr1g090853 1.0kb upstream 1.0kb upstream 4607 true chr1: 40903300-40907906 Medicago truncatula
Medtr1g090853 1.0kb upstream 1.0kb upstream 1000 false chr1: 40906907-40907906 Medicago truncatula
Medtr1g090853 1.0kb downstream 1.0kb downstream 4607 true chr1: 40902300-40906906 Medicago truncatula
Medtr1g090853 1.0kb downstream 1.0kb downstream 1000 false chr1: 40902300-40903299 Medicago truncatula
Medtr1g090853 2.0kb upstream 2.0kb upstream 5607 true chr1: 40903300-40908906 Medicago truncatula
Medtr1g090853 2.0kb upstream 2.0kb upstream 2000 false chr1: 40906907-40908906 Medicago truncatula
Medtr1g090853 2.0kb downstream 2.0kb downstream 5607 true chr1: 40901300-40906906 Medicago truncatula
Medtr1g090853 2.0kb downstream 2.0kb downstream 2000 false chr1: 40901300-40903299 Medicago truncatula
Medtr1g090853 5.0kb upstream 5.0kb upstream 8607 true chr1: 40903300-40911906 Medicago truncatula
Medtr1g090853 5.0kb upstream 5.0kb upstream 5000 false chr1: 40906907-40911906 Medicago truncatula
Medtr1g090853 5.0kb downstream 5.0kb downstream 8607 true chr1: 40898300-40906906 Medicago truncatula
Medtr1g090853 5.0kb downstream 5.0kb downstream 5000 false chr1: 40898300-40903299 Medicago truncatula
Medtr1g090853 10.0kb upstream 10.0kb upstream 13607 true chr1: 40903300-40916906 Medicago truncatula
Medtr1g090853 10.0kb upstream 10.0kb upstream 10000 false chr1: 40906907-40916906 Medicago truncatula
Medtr1g090853 10.0kb downstream 10.0kb downstream 13607 true chr1: 40893300-40906906 Medicago truncatula
Medtr1g090853 10.0kb downstream 10.0kb downstream 10000 false chr1: 40893300-40903299 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026775 5273 Angiosperm View MSA
122305675 5265 Fabidae View MSA
124060685 5270 Rosid View MSA
123752570 5271 Pentapetalae View MSA
122794894 5272 Eudicot View MSA
121296550 5274 Embryophyte View MSA
123334696 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.855        
cufflinks 1.107        
cufflinks 1.436        
cufflinks 2.307        
cufflinks 2.692        
cufflinks 0.278       Low
cufflinks 2.652        
cufflinks 2.015        
cufflinks 3.649       High

0 Strain