Gene : Medtr1g093060 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11229 - 50S RIBOSOMAL PROTEIN L3 Description:  50S ribosomal protein L3P
Genomic Order:  5189 Name:  ? Medtr1g093060
Secondary Identifier:  ? PAC:31093488
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g093060 0.5kb upstream 0.5kb upstream 4218 true chr1: 41905135-41909352 Medicago truncatula
Medtr1g093060 0.5kb upstream 0.5kb upstream 500 false chr1: 41908853-41909352 Medicago truncatula
Medtr1g093060 0.5kb downstream 0.5kb downstream 4218 true chr1: 41904635-41908852 Medicago truncatula
Medtr1g093060 0.5kb downstream 0.5kb downstream 500 false chr1: 41904635-41905134 Medicago truncatula
Medtr1g093060 1.0kb upstream 1.0kb upstream 4718 true chr1: 41905135-41909852 Medicago truncatula
Medtr1g093060 1.0kb upstream 1.0kb upstream 1000 false chr1: 41908853-41909852 Medicago truncatula
Medtr1g093060 1.0kb downstream 1.0kb downstream 4718 true chr1: 41904135-41908852 Medicago truncatula
Medtr1g093060 1.0kb downstream 1.0kb downstream 1000 false chr1: 41904135-41905134 Medicago truncatula
Medtr1g093060 2.0kb upstream 2.0kb upstream 5718 true chr1: 41905135-41910852 Medicago truncatula
Medtr1g093060 2.0kb upstream 2.0kb upstream 2000 false chr1: 41908853-41910852 Medicago truncatula
Medtr1g093060 2.0kb downstream 2.0kb downstream 5718 true chr1: 41903135-41908852 Medicago truncatula
Medtr1g093060 2.0kb downstream 2.0kb downstream 2000 false chr1: 41903135-41905134 Medicago truncatula
Medtr1g093060 5.0kb upstream 5.0kb upstream 8718 true chr1: 41905135-41913852 Medicago truncatula
Medtr1g093060 5.0kb upstream 5.0kb upstream 5000 false chr1: 41908853-41913852 Medicago truncatula
Medtr1g093060 5.0kb downstream 5.0kb downstream 8718 true chr1: 41900135-41908852 Medicago truncatula
Medtr1g093060 5.0kb downstream 5.0kb downstream 5000 false chr1: 41900135-41905134 Medicago truncatula
Medtr1g093060 10.0kb upstream 10.0kb upstream 13718 true chr1: 41905135-41918852 Medicago truncatula
Medtr1g093060 10.0kb upstream 10.0kb upstream 10000 false chr1: 41908853-41918852 Medicago truncatula
Medtr1g093060 10.0kb downstream 10.0kb downstream 13718 true chr1: 41895135-41908852 Medicago truncatula
Medtr1g093060 10.0kb downstream 10.0kb downstream 10000 false chr1: 41895135-41905134 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041501 5273 Angiosperm View MSA
122305263 5265 Fabidae View MSA
124071228 5270 Rosid View MSA
123739154 5271 Pentapetalae View MSA
122789035 5272 Eudicot View MSA
121347550 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.055       High
cufflinks 2.85        
cufflinks 3.58        
cufflinks 1.034       Low
cufflinks 4.779        
cufflinks 0.69       Low
cufflinks 2.461        
cufflinks 2.9        
cufflinks 3.309        

0 Strain