Gene : Medtr1g092570 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.1.3.64 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase Description:  myotubularin-like phosphatase II-like protein
Genomic Order:  5130 Name:  ? Medtr1g092570
Secondary Identifier:  ? PAC:31093832
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6367 Medicago truncatula pathologic  
Mtruncatula PWY-6368 Medicago truncatula pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g092570 0.5kb upstream 0.5kb upstream 6866 true chr1: 41481303-41488168 Medicago truncatula
Medtr1g092570 0.5kb upstream 0.5kb upstream 500 false chr1: 41481303-41481802 Medicago truncatula
Medtr1g092570 0.5kb downstream 0.5kb downstream 6866 true chr1: 41481803-41488668 Medicago truncatula
Medtr1g092570 0.5kb downstream 0.5kb downstream 500 false chr1: 41488169-41488668 Medicago truncatula
Medtr1g092570 1.0kb upstream 1.0kb upstream 7366 true chr1: 41480803-41488168 Medicago truncatula
Medtr1g092570 1.0kb upstream 1.0kb upstream 1000 false chr1: 41480803-41481802 Medicago truncatula
Medtr1g092570 1.0kb downstream 1.0kb downstream 7366 true chr1: 41481803-41489168 Medicago truncatula
Medtr1g092570 1.0kb downstream 1.0kb downstream 1000 false chr1: 41488169-41489168 Medicago truncatula
Medtr1g092570 2.0kb upstream 2.0kb upstream 8366 true chr1: 41479803-41488168 Medicago truncatula
Medtr1g092570 2.0kb upstream 2.0kb upstream 2000 false chr1: 41479803-41481802 Medicago truncatula
Medtr1g092570 2.0kb downstream 2.0kb downstream 8366 true chr1: 41481803-41490168 Medicago truncatula
Medtr1g092570 2.0kb downstream 2.0kb downstream 2000 false chr1: 41488169-41490168 Medicago truncatula
Medtr1g092570 5.0kb upstream 5.0kb upstream 11366 true chr1: 41476803-41488168 Medicago truncatula
Medtr1g092570 5.0kb upstream 5.0kb upstream 5000 false chr1: 41476803-41481802 Medicago truncatula
Medtr1g092570 5.0kb downstream 5.0kb downstream 11366 true chr1: 41481803-41493168 Medicago truncatula
Medtr1g092570 5.0kb downstream 5.0kb downstream 5000 false chr1: 41488169-41493168 Medicago truncatula
Medtr1g092570 10.0kb upstream 10.0kb upstream 16366 true chr1: 41471803-41488168 Medicago truncatula
Medtr1g092570 10.0kb upstream 10.0kb upstream 10000 false chr1: 41471803-41481802 Medicago truncatula
Medtr1g092570 10.0kb downstream 10.0kb downstream 16366 true chr1: 41481803-41498168 Medicago truncatula
Medtr1g092570 10.0kb downstream 10.0kb downstream 10000 false chr1: 41488169-41498168 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656973 5273 Angiosperm View MSA
122255822 5265 Fabidae Singleton cluster - no MSA
124037883 5270 Rosid View MSA
123610549 5271 Pentapetalae View MSA
122645161 5272 Eudicot View MSA
120929028 5274 Embryophyte View MSA
122969606 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.026       High
cufflinks 0.882        
cufflinks 1.238        
cufflinks 0.672       Low
cufflinks 1.148        
cufflinks 0.453       Low
cufflinks 1.659        
cufflinks 1.186        
cufflinks 1.166        

0 Strain