Gene : Medtr1g094065 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Description:  peptidyl-prolyl cis-trans isomerase
Genomic Order:  5232 Name:  ? Medtr1g094065
Secondary Identifier:  ? PAC:31095434
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g094065 0.5kb upstream 0.5kb upstream 5607 true chr1: 42248403-42254009 Medicago truncatula
Medtr1g094065 0.5kb upstream 0.5kb upstream 500 false chr1: 42248403-42248902 Medicago truncatula
Medtr1g094065 0.5kb downstream 0.5kb downstream 5607 true chr1: 42248903-42254509 Medicago truncatula
Medtr1g094065 0.5kb downstream 0.5kb downstream 500 false chr1: 42254010-42254509 Medicago truncatula
Medtr1g094065 1.0kb upstream 1.0kb upstream 6107 true chr1: 42247903-42254009 Medicago truncatula
Medtr1g094065 1.0kb upstream 1.0kb upstream 1000 false chr1: 42247903-42248902 Medicago truncatula
Medtr1g094065 1.0kb downstream 1.0kb downstream 6107 true chr1: 42248903-42255009 Medicago truncatula
Medtr1g094065 1.0kb downstream 1.0kb downstream 1000 false chr1: 42254010-42255009 Medicago truncatula
Medtr1g094065 2.0kb upstream 2.0kb upstream 7107 true chr1: 42246903-42254009 Medicago truncatula
Medtr1g094065 2.0kb upstream 2.0kb upstream 2000 false chr1: 42246903-42248902 Medicago truncatula
Medtr1g094065 2.0kb downstream 2.0kb downstream 7107 true chr1: 42248903-42256009 Medicago truncatula
Medtr1g094065 2.0kb downstream 2.0kb downstream 2000 false chr1: 42254010-42256009 Medicago truncatula
Medtr1g094065 5.0kb upstream 5.0kb upstream 10107 true chr1: 42243903-42254009 Medicago truncatula
Medtr1g094065 5.0kb upstream 5.0kb upstream 5000 false chr1: 42243903-42248902 Medicago truncatula
Medtr1g094065 5.0kb downstream 5.0kb downstream 10107 true chr1: 42248903-42259009 Medicago truncatula
Medtr1g094065 5.0kb downstream 5.0kb downstream 5000 false chr1: 42254010-42259009 Medicago truncatula
Medtr1g094065 10.0kb upstream 10.0kb upstream 15107 true chr1: 42238903-42254009 Medicago truncatula
Medtr1g094065 10.0kb upstream 10.0kb upstream 10000 false chr1: 42238903-42248902 Medicago truncatula
Medtr1g094065 10.0kb downstream 10.0kb downstream 15107 true chr1: 42248903-42264009 Medicago truncatula
Medtr1g094065 10.0kb downstream 10.0kb downstream 10000 false chr1: 42254010-42264009 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301265 5265 Fabidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.492        
cufflinks 3.238        
cufflinks 3.695        
cufflinks 3.801        
cufflinks 3.009        
cufflinks 3.27        
cufflinks 4.986       High
cufflinks 2.933       Low
cufflinks 5.288       High

0 Strain