Gene : Medtr1g093750 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF139 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Description:  basic helix loop helix (BHLH) DNA-binding family protein
Genomic Order:  5206 Name:  ? Medtr1g093750
Secondary Identifier:  ? PAC:31100087
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g093750 0.5kb upstream 0.5kb upstream 3571 true chr1: 42060309-42063879 Medicago truncatula
Medtr1g093750 0.5kb upstream 0.5kb upstream 500 false chr1: 42063380-42063879 Medicago truncatula
Medtr1g093750 0.5kb downstream 0.5kb downstream 3571 true chr1: 42059809-42063379 Medicago truncatula
Medtr1g093750 0.5kb downstream 0.5kb downstream 500 false chr1: 42059809-42060308 Medicago truncatula
Medtr1g093750 1.0kb upstream 1.0kb upstream 4071 true chr1: 42060309-42064379 Medicago truncatula
Medtr1g093750 1.0kb upstream 1.0kb upstream 1000 false chr1: 42063380-42064379 Medicago truncatula
Medtr1g093750 1.0kb downstream 1.0kb downstream 4071 true chr1: 42059309-42063379 Medicago truncatula
Medtr1g093750 1.0kb downstream 1.0kb downstream 1000 false chr1: 42059309-42060308 Medicago truncatula
Medtr1g093750 2.0kb upstream 2.0kb upstream 5071 true chr1: 42060309-42065379 Medicago truncatula
Medtr1g093750 2.0kb upstream 2.0kb upstream 2000 false chr1: 42063380-42065379 Medicago truncatula
Medtr1g093750 2.0kb downstream 2.0kb downstream 5071 true chr1: 42058309-42063379 Medicago truncatula
Medtr1g093750 2.0kb downstream 2.0kb downstream 2000 false chr1: 42058309-42060308 Medicago truncatula
Medtr1g093750 5.0kb upstream 5.0kb upstream 8071 true chr1: 42060309-42068379 Medicago truncatula
Medtr1g093750 5.0kb upstream 5.0kb upstream 5000 false chr1: 42063380-42068379 Medicago truncatula
Medtr1g093750 5.0kb downstream 5.0kb downstream 8071 true chr1: 42055309-42063379 Medicago truncatula
Medtr1g093750 5.0kb downstream 5.0kb downstream 5000 false chr1: 42055309-42060308 Medicago truncatula
Medtr1g093750 10.0kb upstream 10.0kb upstream 13071 true chr1: 42060309-42073379 Medicago truncatula
Medtr1g093750 10.0kb upstream 10.0kb upstream 10000 false chr1: 42063380-42073379 Medicago truncatula
Medtr1g093750 10.0kb downstream 10.0kb downstream 13071 true chr1: 42050309-42063379 Medicago truncatula
Medtr1g093750 10.0kb downstream 10.0kb downstream 10000 false chr1: 42050309-42060308 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311698 5265 Fabidae View MSA
124065415 5270 Rosid View MSA
123749080 5271 Pentapetalae View MSA
122789211 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low Low
cufflinks 1.089        
cufflinks 0.848        
cufflinks 0.17        
cufflinks 1.324       High
cufflinks 0.287        
cufflinks 0.627        
cufflinks 0.602        
cufflinks 0.636        

0 Strain