Gene : Medtr1g094620 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22950:SF240 - TRANSMEMBRANE AMINO ACID TRANSPORTER-RELATED Description:  transmembrane amino acid transporter family protein
Genomic Order:  5265 Name:  ? Medtr1g094620
Secondary Identifier:  ? PAC:31100420
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g094620 0.5kb upstream 0.5kb upstream 5568 true chr1: 42517780-42523347 Medicago truncatula
Medtr1g094620 0.5kb upstream 0.5kb upstream 500 false chr1: 42517780-42518279 Medicago truncatula
Medtr1g094620 0.5kb downstream 0.5kb downstream 5568 true chr1: 42518280-42523847 Medicago truncatula
Medtr1g094620 0.5kb downstream 0.5kb downstream 500 false chr1: 42523348-42523847 Medicago truncatula
Medtr1g094620 1.0kb upstream 1.0kb upstream 6068 true chr1: 42517280-42523347 Medicago truncatula
Medtr1g094620 1.0kb upstream 1.0kb upstream 1000 false chr1: 42517280-42518279 Medicago truncatula
Medtr1g094620 1.0kb downstream 1.0kb downstream 6068 true chr1: 42518280-42524347 Medicago truncatula
Medtr1g094620 1.0kb downstream 1.0kb downstream 1000 false chr1: 42523348-42524347 Medicago truncatula
Medtr1g094620 2.0kb upstream 2.0kb upstream 7068 true chr1: 42516280-42523347 Medicago truncatula
Medtr1g094620 2.0kb upstream 2.0kb upstream 2000 false chr1: 42516280-42518279 Medicago truncatula
Medtr1g094620 2.0kb downstream 2.0kb downstream 7068 true chr1: 42518280-42525347 Medicago truncatula
Medtr1g094620 2.0kb downstream 2.0kb downstream 2000 false chr1: 42523348-42525347 Medicago truncatula
Medtr1g094620 5.0kb upstream 5.0kb upstream 10068 true chr1: 42513280-42523347 Medicago truncatula
Medtr1g094620 5.0kb upstream 5.0kb upstream 5000 false chr1: 42513280-42518279 Medicago truncatula
Medtr1g094620 5.0kb downstream 5.0kb downstream 10068 true chr1: 42518280-42528347 Medicago truncatula
Medtr1g094620 5.0kb downstream 5.0kb downstream 5000 false chr1: 42523348-42528347 Medicago truncatula
Medtr1g094620 10.0kb upstream 10.0kb upstream 15068 true chr1: 42508280-42523347 Medicago truncatula
Medtr1g094620 10.0kb upstream 10.0kb upstream 10000 false chr1: 42508280-42518279 Medicago truncatula
Medtr1g094620 10.0kb downstream 10.0kb downstream 15068 true chr1: 42518280-42533347 Medicago truncatula
Medtr1g094620 10.0kb downstream 10.0kb downstream 10000 false chr1: 42523348-42533347 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301224 5265 Fabidae View MSA
124062322 5270 Rosid View MSA
123752113 5271 Pentapetalae View MSA
122789589 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.255       Low
cufflinks 13.598     High  
cufflinks 22.906     High High
cufflinks 12.999     High  
cufflinks 10.269        
cufflinks 5.452        
cufflinks 4.958       Low
cufflinks 20.241     High High
cufflinks 6.432        

0 Strain