Gene : Medtr1g094650 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN Description:  cysteine proteinase superfamily protein
Genomic Order:  5269 Name:  ? Medtr1g094650
Secondary Identifier:  ? PAC:31093502
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g094650 0.5kb upstream 0.5kb upstream 7401 true chr1: 42537377-42544777 Medicago truncatula
Medtr1g094650 0.5kb upstream 0.5kb upstream 500 false chr1: 42544278-42544777 Medicago truncatula
Medtr1g094650 0.5kb downstream 0.5kb downstream 7401 true chr1: 42536877-42544277 Medicago truncatula
Medtr1g094650 0.5kb downstream 0.5kb downstream 500 false chr1: 42536877-42537376 Medicago truncatula
Medtr1g094650 1.0kb upstream 1.0kb upstream 7901 true chr1: 42537377-42545277 Medicago truncatula
Medtr1g094650 1.0kb upstream 1.0kb upstream 1000 false chr1: 42544278-42545277 Medicago truncatula
Medtr1g094650 1.0kb downstream 1.0kb downstream 7901 true chr1: 42536377-42544277 Medicago truncatula
Medtr1g094650 1.0kb downstream 1.0kb downstream 1000 false chr1: 42536377-42537376 Medicago truncatula
Medtr1g094650 2.0kb upstream 2.0kb upstream 8901 true chr1: 42537377-42546277 Medicago truncatula
Medtr1g094650 2.0kb upstream 2.0kb upstream 2000 false chr1: 42544278-42546277 Medicago truncatula
Medtr1g094650 2.0kb downstream 2.0kb downstream 8901 true chr1: 42535377-42544277 Medicago truncatula
Medtr1g094650 2.0kb downstream 2.0kb downstream 2000 false chr1: 42535377-42537376 Medicago truncatula
Medtr1g094650 5.0kb upstream 5.0kb upstream 11901 true chr1: 42537377-42549277 Medicago truncatula
Medtr1g094650 5.0kb upstream 5.0kb upstream 5000 false chr1: 42544278-42549277 Medicago truncatula
Medtr1g094650 5.0kb downstream 5.0kb downstream 11901 true chr1: 42532377-42544277 Medicago truncatula
Medtr1g094650 5.0kb downstream 5.0kb downstream 5000 false chr1: 42532377-42537376 Medicago truncatula
Medtr1g094650 10.0kb upstream 10.0kb upstream 16901 true chr1: 42537377-42554277 Medicago truncatula
Medtr1g094650 10.0kb upstream 10.0kb upstream 10000 false chr1: 42544278-42554277 Medicago truncatula
Medtr1g094650 10.0kb downstream 10.0kb downstream 16901 true chr1: 42527377-42544277 Medicago truncatula
Medtr1g094650 10.0kb downstream 10.0kb downstream 10000 false chr1: 42527377-42537376 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305977 5265 Fabidae View MSA
124066333 5270 Rosid View MSA
123743617 5271 Pentapetalae View MSA
122787682 5272 Eudicot View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.665       High
cufflinks 0.487        
cufflinks 0.609        
cufflinks 0.406        
cufflinks 0.614        
cufflinks 0.398        
cufflinks 0.434        
cufflinks 0.537        
cufflinks 0.334       Low

0 Strain