Gene : Medtr1g094215 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Description:  armadillo/beta-catenin repeat protein
Genomic Order:  5253 Name:  ? Medtr1g094215
Secondary Identifier:  ? PAC:31100275
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g094215 0.5kb upstream 0.5kb upstream 4976 true chr1: 42419604-42424579 Medicago truncatula
Medtr1g094215 0.5kb upstream 0.5kb upstream 500 false chr1: 42424080-42424579 Medicago truncatula
Medtr1g094215 0.5kb downstream 0.5kb downstream 4976 true chr1: 42419104-42424079 Medicago truncatula
Medtr1g094215 0.5kb downstream 0.5kb downstream 500 false chr1: 42419104-42419603 Medicago truncatula
Medtr1g094215 1.0kb upstream 1.0kb upstream 5476 true chr1: 42419604-42425079 Medicago truncatula
Medtr1g094215 1.0kb upstream 1.0kb upstream 1000 false chr1: 42424080-42425079 Medicago truncatula
Medtr1g094215 1.0kb downstream 1.0kb downstream 5476 true chr1: 42418604-42424079 Medicago truncatula
Medtr1g094215 1.0kb downstream 1.0kb downstream 1000 false chr1: 42418604-42419603 Medicago truncatula
Medtr1g094215 2.0kb upstream 2.0kb upstream 6476 true chr1: 42419604-42426079 Medicago truncatula
Medtr1g094215 2.0kb upstream 2.0kb upstream 2000 false chr1: 42424080-42426079 Medicago truncatula
Medtr1g094215 2.0kb downstream 2.0kb downstream 6476 true chr1: 42417604-42424079 Medicago truncatula
Medtr1g094215 2.0kb downstream 2.0kb downstream 2000 false chr1: 42417604-42419603 Medicago truncatula
Medtr1g094215 5.0kb upstream 5.0kb upstream 9476 true chr1: 42419604-42429079 Medicago truncatula
Medtr1g094215 5.0kb upstream 5.0kb upstream 5000 false chr1: 42424080-42429079 Medicago truncatula
Medtr1g094215 5.0kb downstream 5.0kb downstream 9476 true chr1: 42414604-42424079 Medicago truncatula
Medtr1g094215 5.0kb downstream 5.0kb downstream 5000 false chr1: 42414604-42419603 Medicago truncatula
Medtr1g094215 10.0kb upstream 10.0kb upstream 14476 true chr1: 42419604-42434079 Medicago truncatula
Medtr1g094215 10.0kb upstream 10.0kb upstream 10000 false chr1: 42424080-42434079 Medicago truncatula
Medtr1g094215 10.0kb downstream 10.0kb downstream 14476 true chr1: 42409604-42424079 Medicago truncatula
Medtr1g094215 10.0kb downstream 10.0kb downstream 10000 false chr1: 42409604-42419603 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308231 5265 Fabidae View MSA
124065418 5270 Rosid View MSA
123739906 5271 Pentapetalae View MSA
122790994 5272 Eudicot View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.649     High High
cufflinks 2.409       Low
cufflinks 4.508        
cufflinks 4.026        
cufflinks 2.882        
cufflinks 4.767        
cufflinks 13.901     High High
cufflinks 2.923        
cufflinks 11.572     High High

0 Strain