Gene : Medtr1g094610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22883:SF19 - PROTEIN S-ACYLTRANSFERASE 15-RELATED Description:  DHHC-type zinc finger protein
Genomic Order:  5263 Name:  ? Medtr1g094610
Secondary Identifier:  ? PAC:31093861
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g094610 0.5kb upstream 0.5kb upstream 6154 true chr1: 42499078-42505231 Medicago truncatula
Medtr1g094610 0.5kb upstream 0.5kb upstream 500 false chr1: 42499078-42499577 Medicago truncatula
Medtr1g094610 0.5kb downstream 0.5kb downstream 6154 true chr1: 42499578-42505731 Medicago truncatula
Medtr1g094610 0.5kb downstream 0.5kb downstream 500 false chr1: 42505232-42505731 Medicago truncatula
Medtr1g094610 1.0kb upstream 1.0kb upstream 6654 true chr1: 42498578-42505231 Medicago truncatula
Medtr1g094610 1.0kb upstream 1.0kb upstream 1000 false chr1: 42498578-42499577 Medicago truncatula
Medtr1g094610 1.0kb downstream 1.0kb downstream 6654 true chr1: 42499578-42506231 Medicago truncatula
Medtr1g094610 1.0kb downstream 1.0kb downstream 1000 false chr1: 42505232-42506231 Medicago truncatula
Medtr1g094610 2.0kb upstream 2.0kb upstream 7654 true chr1: 42497578-42505231 Medicago truncatula
Medtr1g094610 2.0kb upstream 2.0kb upstream 2000 false chr1: 42497578-42499577 Medicago truncatula
Medtr1g094610 2.0kb downstream 2.0kb downstream 7654 true chr1: 42499578-42507231 Medicago truncatula
Medtr1g094610 2.0kb downstream 2.0kb downstream 2000 false chr1: 42505232-42507231 Medicago truncatula
Medtr1g094610 5.0kb upstream 5.0kb upstream 10654 true chr1: 42494578-42505231 Medicago truncatula
Medtr1g094610 5.0kb upstream 5.0kb upstream 5000 false chr1: 42494578-42499577 Medicago truncatula
Medtr1g094610 5.0kb downstream 5.0kb downstream 10654 true chr1: 42499578-42510231 Medicago truncatula
Medtr1g094610 5.0kb downstream 5.0kb downstream 5000 false chr1: 42505232-42510231 Medicago truncatula
Medtr1g094610 10.0kb upstream 10.0kb upstream 15654 true chr1: 42489578-42505231 Medicago truncatula
Medtr1g094610 10.0kb upstream 10.0kb upstream 10000 false chr1: 42489578-42499577 Medicago truncatula
Medtr1g094610 10.0kb downstream 10.0kb downstream 15654 true chr1: 42499578-42515231 Medicago truncatula
Medtr1g094610 10.0kb downstream 10.0kb downstream 10000 false chr1: 42505232-42515231 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306980 5265 Fabidae View MSA
124067718 5270 Rosid View MSA
123753562 5271 Pentapetalae View MSA
122794013 5272 Eudicot View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.135        
cufflinks 0.761        
cufflinks 0.831        
cufflinks 1.112        
cufflinks 0.922        
cufflinks 0.543       Low
cufflinks 1.347       High
cufflinks 0.673       Low
cufflinks 1.176        

0 Strain