Gene : Medtr2g015930 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG1542//KOG1543 - Cysteine proteinase Cathepsin F // Cysteine proteinase Cathepsin L Description:  papain family cysteine protease
Genomic Order:  717 Name:  ? Medtr2g015930
Secondary Identifier:  ? PAC:31069164
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g015930 0.5kb upstream 0.5kb upstream 3942 true chr2: 4783577-4787518 Medicago truncatula
Medtr2g015930 0.5kb upstream 0.5kb upstream 500 false chr2: 4783577-4784076 Medicago truncatula
Medtr2g015930 0.5kb downstream 0.5kb downstream 3942 true chr2: 4784077-4788018 Medicago truncatula
Medtr2g015930 0.5kb downstream 0.5kb downstream 500 false chr2: 4787519-4788018 Medicago truncatula
Medtr2g015930 1.0kb upstream 1.0kb upstream 4442 true chr2: 4783077-4787518 Medicago truncatula
Medtr2g015930 1.0kb upstream 1.0kb upstream 1000 false chr2: 4783077-4784076 Medicago truncatula
Medtr2g015930 1.0kb downstream 1.0kb downstream 4442 true chr2: 4784077-4788518 Medicago truncatula
Medtr2g015930 1.0kb downstream 1.0kb downstream 1000 false chr2: 4787519-4788518 Medicago truncatula
Medtr2g015930 2.0kb upstream 2.0kb upstream 5442 true chr2: 4782077-4787518 Medicago truncatula
Medtr2g015930 2.0kb upstream 2.0kb upstream 2000 false chr2: 4782077-4784076 Medicago truncatula
Medtr2g015930 2.0kb downstream 2.0kb downstream 5442 true chr2: 4784077-4789518 Medicago truncatula
Medtr2g015930 2.0kb downstream 2.0kb downstream 2000 false chr2: 4787519-4789518 Medicago truncatula
Medtr2g015930 5.0kb upstream 5.0kb upstream 8442 true chr2: 4779077-4787518 Medicago truncatula
Medtr2g015930 5.0kb upstream 5.0kb upstream 5000 false chr2: 4779077-4784076 Medicago truncatula
Medtr2g015930 5.0kb downstream 5.0kb downstream 8442 true chr2: 4784077-4792518 Medicago truncatula
Medtr2g015930 5.0kb downstream 5.0kb downstream 5000 false chr2: 4787519-4792518 Medicago truncatula
Medtr2g015930 10.0kb upstream 10.0kb upstream 13442 true chr2: 4774077-4787518 Medicago truncatula
Medtr2g015930 10.0kb upstream 10.0kb upstream 10000 false chr2: 4774077-4784076 Medicago truncatula
Medtr2g015930 10.0kb downstream 10.0kb downstream 13442 true chr2: 4784077-4797518 Medicago truncatula
Medtr2g015930 10.0kb downstream 10.0kb downstream 10000 false chr2: 4787519-4797518 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
122297847 5265 Fabidae View MSA
124036180 5270 Rosid View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain