Gene : Medtr2g015680 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11594 - 40S RIBOSOMAL PROTEIN S27 Description:  40S ribosomal protein S27-1
Genomic Order:  691 Name:  ? Medtr2g015680
Secondary Identifier:  ? PAC:31062778
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g015680 0.5kb upstream 0.5kb upstream 1784 true chr2: 4670026-4671809 Medicago truncatula
Medtr2g015680 0.5kb upstream 0.5kb upstream 500 false chr2: 4671310-4671809 Medicago truncatula
Medtr2g015680 0.5kb downstream 0.5kb downstream 1784 true chr2: 4669526-4671309 Medicago truncatula
Medtr2g015680 0.5kb downstream 0.5kb downstream 500 false chr2: 4669526-4670025 Medicago truncatula
Medtr2g015680 1.0kb upstream 1.0kb upstream 2284 true chr2: 4670026-4672309 Medicago truncatula
Medtr2g015680 1.0kb upstream 1.0kb upstream 1000 false chr2: 4671310-4672309 Medicago truncatula
Medtr2g015680 1.0kb downstream 1.0kb downstream 2284 true chr2: 4669026-4671309 Medicago truncatula
Medtr2g015680 1.0kb downstream 1.0kb downstream 1000 false chr2: 4669026-4670025 Medicago truncatula
Medtr2g015680 2.0kb upstream 2.0kb upstream 3284 true chr2: 4670026-4673309 Medicago truncatula
Medtr2g015680 2.0kb upstream 2.0kb upstream 2000 false chr2: 4671310-4673309 Medicago truncatula
Medtr2g015680 2.0kb downstream 2.0kb downstream 3284 true chr2: 4668026-4671309 Medicago truncatula
Medtr2g015680 2.0kb downstream 2.0kb downstream 2000 false chr2: 4668026-4670025 Medicago truncatula
Medtr2g015680 5.0kb upstream 5.0kb upstream 6284 true chr2: 4670026-4676309 Medicago truncatula
Medtr2g015680 5.0kb upstream 5.0kb upstream 5000 false chr2: 4671310-4676309 Medicago truncatula
Medtr2g015680 5.0kb downstream 5.0kb downstream 6284 true chr2: 4665026-4671309 Medicago truncatula
Medtr2g015680 5.0kb downstream 5.0kb downstream 5000 false chr2: 4665026-4670025 Medicago truncatula
Medtr2g015680 10.0kb upstream 10.0kb upstream 11284 true chr2: 4670026-4681309 Medicago truncatula
Medtr2g015680 10.0kb upstream 10.0kb upstream 10000 false chr2: 4671310-4681309 Medicago truncatula
Medtr2g015680 10.0kb downstream 10.0kb downstream 11284 true chr2: 4660026-4671309 Medicago truncatula
Medtr2g015680 10.0kb downstream 10.0kb downstream 10000 false chr2: 4660026-4670025 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122314519 5265 Fabidae View MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.419     High Low
cufflinks 68.573     High Low
cufflinks 77.751     High  
cufflinks 161.043     High High
cufflinks 110.082     High  
cufflinks 179.132     High High
cufflinks 121.935     High  
cufflinks 88.348     High  
cufflinks 139.616     High  

0 Strain