Gene : Medtr2g016680 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  767
Name:  ? Medtr2g016680 Secondary Identifier:  ? PAC:31062812
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g016680 0.5kb upstream 0.5kb upstream 983 true chr2: 5148450-5149432 Medicago truncatula
Medtr2g016680 0.5kb upstream 0.5kb upstream 500 false chr2: 5148450-5148949 Medicago truncatula
Medtr2g016680 0.5kb downstream 0.5kb downstream 983 true chr2: 5148950-5149932 Medicago truncatula
Medtr2g016680 0.5kb downstream 0.5kb downstream 500 false chr2: 5149433-5149932 Medicago truncatula
Medtr2g016680 1.0kb upstream 1.0kb upstream 1483 true chr2: 5147950-5149432 Medicago truncatula
Medtr2g016680 1.0kb upstream 1.0kb upstream 1000 false chr2: 5147950-5148949 Medicago truncatula
Medtr2g016680 1.0kb downstream 1.0kb downstream 1483 true chr2: 5148950-5150432 Medicago truncatula
Medtr2g016680 1.0kb downstream 1.0kb downstream 1000 false chr2: 5149433-5150432 Medicago truncatula
Medtr2g016680 2.0kb upstream 2.0kb upstream 2483 true chr2: 5146950-5149432 Medicago truncatula
Medtr2g016680 2.0kb upstream 2.0kb upstream 2000 false chr2: 5146950-5148949 Medicago truncatula
Medtr2g016680 2.0kb downstream 2.0kb downstream 2483 true chr2: 5148950-5151432 Medicago truncatula
Medtr2g016680 2.0kb downstream 2.0kb downstream 2000 false chr2: 5149433-5151432 Medicago truncatula
Medtr2g016680 5.0kb upstream 5.0kb upstream 5483 true chr2: 5143950-5149432 Medicago truncatula
Medtr2g016680 5.0kb upstream 5.0kb upstream 5000 false chr2: 5143950-5148949 Medicago truncatula
Medtr2g016680 5.0kb downstream 5.0kb downstream 5483 true chr2: 5148950-5154432 Medicago truncatula
Medtr2g016680 5.0kb downstream 5.0kb downstream 5000 false chr2: 5149433-5154432 Medicago truncatula
Medtr2g016680 10.0kb upstream 10.0kb upstream 10483 true chr2: 5138950-5149432 Medicago truncatula
Medtr2g016680 10.0kb upstream 10.0kb upstream 10000 false chr2: 5138950-5148949 Medicago truncatula
Medtr2g016680 10.0kb downstream 10.0kb downstream 10483 true chr2: 5148950-5159432 Medicago truncatula
Medtr2g016680 10.0kb downstream 10.0kb downstream 10000 false chr2: 5149433-5159432 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310873 5265 Fabidae View MSA
124061036 5270 Rosid View MSA
123741474 5271 Pentapetalae View MSA
122787658 5272 Eudicot View MSA
122046165 5273 Angiosperm View MSA
121310567 5274 Embryophyte View MSA
123348018 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.014       Low
cufflinks 10.586     High  
cufflinks 12.453     High  
cufflinks 42.689     High High
cufflinks 9.669        
cufflinks 13.492     High  
cufflinks 27.353     High  
cufflinks 15.696     High  
cufflinks 42.71     High High

0 Strain