Gene : Medtr2g016870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15629//PTHR15629:SF9 - SH3YL1 PROTEIN Description:  RING/FYVE/PHD-type zinc finger protein
Genomic Order:  792 Name:  ? Medtr2g016870
Secondary Identifier:  ? PAC:31064303
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g016870 0.5kb upstream 0.5kb upstream 6740 true chr2: 5317931-5324670 Medicago truncatula
Medtr2g016870 0.5kb upstream 0.5kb upstream 500 false chr2: 5324171-5324670 Medicago truncatula
Medtr2g016870 0.5kb downstream 0.5kb downstream 6740 true chr2: 5317431-5324170 Medicago truncatula
Medtr2g016870 0.5kb downstream 0.5kb downstream 500 false chr2: 5317431-5317930 Medicago truncatula
Medtr2g016870 1.0kb upstream 1.0kb upstream 7240 true chr2: 5317931-5325170 Medicago truncatula
Medtr2g016870 1.0kb upstream 1.0kb upstream 1000 false chr2: 5324171-5325170 Medicago truncatula
Medtr2g016870 1.0kb downstream 1.0kb downstream 7240 true chr2: 5316931-5324170 Medicago truncatula
Medtr2g016870 1.0kb downstream 1.0kb downstream 1000 false chr2: 5316931-5317930 Medicago truncatula
Medtr2g016870 2.0kb upstream 2.0kb upstream 8240 true chr2: 5317931-5326170 Medicago truncatula
Medtr2g016870 2.0kb upstream 2.0kb upstream 2000 false chr2: 5324171-5326170 Medicago truncatula
Medtr2g016870 2.0kb downstream 2.0kb downstream 8240 true chr2: 5315931-5324170 Medicago truncatula
Medtr2g016870 2.0kb downstream 2.0kb downstream 2000 false chr2: 5315931-5317930 Medicago truncatula
Medtr2g016870 5.0kb upstream 5.0kb upstream 11240 true chr2: 5317931-5329170 Medicago truncatula
Medtr2g016870 5.0kb upstream 5.0kb upstream 5000 false chr2: 5324171-5329170 Medicago truncatula
Medtr2g016870 5.0kb downstream 5.0kb downstream 11240 true chr2: 5312931-5324170 Medicago truncatula
Medtr2g016870 5.0kb downstream 5.0kb downstream 5000 false chr2: 5312931-5317930 Medicago truncatula
Medtr2g016870 10.0kb upstream 10.0kb upstream 16240 true chr2: 5317931-5334170 Medicago truncatula
Medtr2g016870 10.0kb upstream 10.0kb upstream 10000 false chr2: 5324171-5334170 Medicago truncatula
Medtr2g016870 10.0kb downstream 10.0kb downstream 16240 true chr2: 5307931-5324170 Medicago truncatula
Medtr2g016870 10.0kb downstream 10.0kb downstream 10000 false chr2: 5307931-5317930 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312037 5265 Fabidae View MSA
124073476 5270 Rosid View MSA
123736905 5271 Pentapetalae View MSA
122785686 5272 Eudicot View MSA
122047876 5273 Angiosperm View MSA
121349418 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.652        
cufflinks 5.871        
cufflinks 9.617        
cufflinks 5.76        
cufflinks 6.687        
cufflinks 4.862       Low
cufflinks 13.682     High High
cufflinks 7.869        
cufflinks 9.944        

0 Strain