Gene : Medtr2g016760 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Description:  DUF1685 family protein
Genomic Order:  773 Name:  ? Medtr2g016760
Secondary Identifier:  ? PAC:31063481
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g016760 0.5kb upstream 0.5kb upstream 2141 true chr2: 5182271-5184411 Medicago truncatula
Medtr2g016760 0.5kb upstream 0.5kb upstream 500 false chr2: 5183912-5184411 Medicago truncatula
Medtr2g016760 0.5kb downstream 0.5kb downstream 2141 true chr2: 5181771-5183911 Medicago truncatula
Medtr2g016760 0.5kb downstream 0.5kb downstream 500 false chr2: 5181771-5182270 Medicago truncatula
Medtr2g016760 1.0kb upstream 1.0kb upstream 2641 true chr2: 5182271-5184911 Medicago truncatula
Medtr2g016760 1.0kb upstream 1.0kb upstream 1000 false chr2: 5183912-5184911 Medicago truncatula
Medtr2g016760 1.0kb downstream 1.0kb downstream 2641 true chr2: 5181271-5183911 Medicago truncatula
Medtr2g016760 1.0kb downstream 1.0kb downstream 1000 false chr2: 5181271-5182270 Medicago truncatula
Medtr2g016760 2.0kb upstream 2.0kb upstream 3641 true chr2: 5182271-5185911 Medicago truncatula
Medtr2g016760 2.0kb upstream 2.0kb upstream 2000 false chr2: 5183912-5185911 Medicago truncatula
Medtr2g016760 2.0kb downstream 2.0kb downstream 3641 true chr2: 5180271-5183911 Medicago truncatula
Medtr2g016760 2.0kb downstream 2.0kb downstream 2000 false chr2: 5180271-5182270 Medicago truncatula
Medtr2g016760 5.0kb upstream 5.0kb upstream 6641 true chr2: 5182271-5188911 Medicago truncatula
Medtr2g016760 5.0kb upstream 5.0kb upstream 5000 false chr2: 5183912-5188911 Medicago truncatula
Medtr2g016760 5.0kb downstream 5.0kb downstream 6641 true chr2: 5177271-5183911 Medicago truncatula
Medtr2g016760 5.0kb downstream 5.0kb downstream 5000 false chr2: 5177271-5182270 Medicago truncatula
Medtr2g016760 10.0kb upstream 10.0kb upstream 11641 true chr2: 5182271-5193911 Medicago truncatula
Medtr2g016760 10.0kb upstream 10.0kb upstream 10000 false chr2: 5183912-5193911 Medicago truncatula
Medtr2g016760 10.0kb downstream 10.0kb downstream 11641 true chr2: 5172271-5183911 Medicago truncatula
Medtr2g016760 10.0kb downstream 10.0kb downstream 10000 false chr2: 5172271-5182270 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122257774 5265 Fabidae Singleton cluster - no MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.291     High  
cufflinks 15.068     High  
cufflinks 19.485     High  
cufflinks 6.593       Low
cufflinks 26.177     High High
cufflinks 10.323        
cufflinks 15.363     High  
cufflinks 16.329     High  
cufflinks 6.841       Low

0 Strain