Gene : Medtr2g017740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33199:SF3 - MACPF DOMAIN-CONTAINING PROTEIN CAD1 Description:  MACPF domain protein
Genomic Order:  813 Name:  ? Medtr2g017740
Secondary Identifier:  ? PAC:31067816
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g017740 0.5kb upstream 0.5kb upstream 6987 true chr2: 5447981-5454967 Medicago truncatula
Medtr2g017740 0.5kb upstream 0.5kb upstream 500 false chr2: 5447981-5448480 Medicago truncatula
Medtr2g017740 0.5kb downstream 0.5kb downstream 6987 true chr2: 5448481-5455467 Medicago truncatula
Medtr2g017740 0.5kb downstream 0.5kb downstream 500 false chr2: 5454968-5455467 Medicago truncatula
Medtr2g017740 1.0kb upstream 1.0kb upstream 7487 true chr2: 5447481-5454967 Medicago truncatula
Medtr2g017740 1.0kb upstream 1.0kb upstream 1000 false chr2: 5447481-5448480 Medicago truncatula
Medtr2g017740 1.0kb downstream 1.0kb downstream 7487 true chr2: 5448481-5455967 Medicago truncatula
Medtr2g017740 1.0kb downstream 1.0kb downstream 1000 false chr2: 5454968-5455967 Medicago truncatula
Medtr2g017740 2.0kb upstream 2.0kb upstream 8487 true chr2: 5446481-5454967 Medicago truncatula
Medtr2g017740 2.0kb upstream 2.0kb upstream 2000 false chr2: 5446481-5448480 Medicago truncatula
Medtr2g017740 2.0kb downstream 2.0kb downstream 8487 true chr2: 5448481-5456967 Medicago truncatula
Medtr2g017740 2.0kb downstream 2.0kb downstream 2000 false chr2: 5454968-5456967 Medicago truncatula
Medtr2g017740 5.0kb upstream 5.0kb upstream 11487 true chr2: 5443481-5454967 Medicago truncatula
Medtr2g017740 5.0kb upstream 5.0kb upstream 5000 false chr2: 5443481-5448480 Medicago truncatula
Medtr2g017740 5.0kb downstream 5.0kb downstream 11487 true chr2: 5448481-5459967 Medicago truncatula
Medtr2g017740 5.0kb downstream 5.0kb downstream 5000 false chr2: 5454968-5459967 Medicago truncatula
Medtr2g017740 10.0kb upstream 10.0kb upstream 16487 true chr2: 5438481-5454967 Medicago truncatula
Medtr2g017740 10.0kb upstream 10.0kb upstream 10000 false chr2: 5438481-5448480 Medicago truncatula
Medtr2g017740 10.0kb downstream 10.0kb downstream 16487 true chr2: 5448481-5464967 Medicago truncatula
Medtr2g017740 10.0kb downstream 10.0kb downstream 10000 false chr2: 5454968-5464967 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306269 5265 Fabidae View MSA
124063432 5270 Rosid View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.017        
cufflinks 2.126       Low
cufflinks 4.838        
cufflinks 4.564        
cufflinks 2.48       Low
cufflinks 5.415        
cufflinks 6.946        
cufflinks 2.29       Low
cufflinks 7.415       High

0 Strain