Gene : Medtr2g019160 M. truncatula Mt4.0v1
Defline:  (1 of 50) PF05553 - Cotton fibre expressed protein (DUF761) Description:  transmembrane protein, putative
Genomic Order:  913 Name:  ? Medtr2g019160
Secondary Identifier:  ? PAC:31067899
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g019160 0.5kb upstream 0.5kb upstream 1547 true chr2: 6184595-6186141 Medicago truncatula
Medtr2g019160 0.5kb upstream 0.5kb upstream 500 false chr2: 6185642-6186141 Medicago truncatula
Medtr2g019160 0.5kb downstream 0.5kb downstream 1547 true chr2: 6184095-6185641 Medicago truncatula
Medtr2g019160 0.5kb downstream 0.5kb downstream 500 false chr2: 6184095-6184594 Medicago truncatula
Medtr2g019160 1.0kb upstream 1.0kb upstream 2047 true chr2: 6184595-6186641 Medicago truncatula
Medtr2g019160 1.0kb upstream 1.0kb upstream 1000 false chr2: 6185642-6186641 Medicago truncatula
Medtr2g019160 1.0kb downstream 1.0kb downstream 2047 true chr2: 6183595-6185641 Medicago truncatula
Medtr2g019160 1.0kb downstream 1.0kb downstream 1000 false chr2: 6183595-6184594 Medicago truncatula
Medtr2g019160 2.0kb upstream 2.0kb upstream 3047 true chr2: 6184595-6187641 Medicago truncatula
Medtr2g019160 2.0kb upstream 2.0kb upstream 2000 false chr2: 6185642-6187641 Medicago truncatula
Medtr2g019160 2.0kb downstream 2.0kb downstream 3047 true chr2: 6182595-6185641 Medicago truncatula
Medtr2g019160 2.0kb downstream 2.0kb downstream 2000 false chr2: 6182595-6184594 Medicago truncatula
Medtr2g019160 5.0kb upstream 5.0kb upstream 6047 true chr2: 6184595-6190641 Medicago truncatula
Medtr2g019160 5.0kb upstream 5.0kb upstream 5000 false chr2: 6185642-6190641 Medicago truncatula
Medtr2g019160 5.0kb downstream 5.0kb downstream 6047 true chr2: 6179595-6185641 Medicago truncatula
Medtr2g019160 5.0kb downstream 5.0kb downstream 5000 false chr2: 6179595-6184594 Medicago truncatula
Medtr2g019160 10.0kb upstream 10.0kb upstream 11047 true chr2: 6184595-6195641 Medicago truncatula
Medtr2g019160 10.0kb upstream 10.0kb upstream 10000 false chr2: 6185642-6195641 Medicago truncatula
Medtr2g019160 10.0kb downstream 10.0kb downstream 11047 true chr2: 6174595-6185641 Medicago truncatula
Medtr2g019160 10.0kb downstream 10.0kb downstream 10000 false chr2: 6174595-6184594 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027233 5273 Angiosperm View MSA
122303269 5265 Fabidae View MSA
124064960 5270 Rosid View MSA
123738835 5271 Pentapetalae View MSA
122769934 5272 Eudicot View MSA
121296919 5274 Embryophyte View MSA
123335025 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.046     Low Low
cufflinks 0.747        
cufflinks 0.652        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.911        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low Low
cufflinks 0.58        
cufflinks 0.203        

0 Strain