Gene : Medtr2g020280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR16517//PTHR16517:SF47 - TUBBY-RELATED Description:  tubby-F-box-like protein
Genomic Order:  983 Name:  ? Medtr2g020280
Secondary Identifier:  ? PAC:31067521
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g020280 0.5kb upstream 0.5kb upstream 5976 true chr2: 6733208-6739183 Medicago truncatula
Medtr2g020280 0.5kb upstream 0.5kb upstream 500 false chr2: 6738684-6739183 Medicago truncatula
Medtr2g020280 0.5kb downstream 0.5kb downstream 5976 true chr2: 6732708-6738683 Medicago truncatula
Medtr2g020280 0.5kb downstream 0.5kb downstream 500 false chr2: 6732708-6733207 Medicago truncatula
Medtr2g020280 1.0kb upstream 1.0kb upstream 6476 true chr2: 6733208-6739683 Medicago truncatula
Medtr2g020280 1.0kb upstream 1.0kb upstream 1000 false chr2: 6738684-6739683 Medicago truncatula
Medtr2g020280 1.0kb downstream 1.0kb downstream 6476 true chr2: 6732208-6738683 Medicago truncatula
Medtr2g020280 1.0kb downstream 1.0kb downstream 1000 false chr2: 6732208-6733207 Medicago truncatula
Medtr2g020280 2.0kb upstream 2.0kb upstream 7476 true chr2: 6733208-6740683 Medicago truncatula
Medtr2g020280 2.0kb upstream 2.0kb upstream 2000 false chr2: 6738684-6740683 Medicago truncatula
Medtr2g020280 2.0kb downstream 2.0kb downstream 7476 true chr2: 6731208-6738683 Medicago truncatula
Medtr2g020280 2.0kb downstream 2.0kb downstream 2000 false chr2: 6731208-6733207 Medicago truncatula
Medtr2g020280 5.0kb upstream 5.0kb upstream 10476 true chr2: 6733208-6743683 Medicago truncatula
Medtr2g020280 5.0kb upstream 5.0kb upstream 5000 false chr2: 6738684-6743683 Medicago truncatula
Medtr2g020280 5.0kb downstream 5.0kb downstream 10476 true chr2: 6728208-6738683 Medicago truncatula
Medtr2g020280 5.0kb downstream 5.0kb downstream 5000 false chr2: 6728208-6733207 Medicago truncatula
Medtr2g020280 10.0kb upstream 10.0kb upstream 15476 true chr2: 6733208-6748683 Medicago truncatula
Medtr2g020280 10.0kb upstream 10.0kb upstream 10000 false chr2: 6738684-6748683 Medicago truncatula
Medtr2g020280 10.0kb downstream 10.0kb downstream 15476 true chr2: 6723208-6738683 Medicago truncatula
Medtr2g020280 10.0kb downstream 10.0kb downstream 10000 false chr2: 6723208-6733207 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309319 5265 Fabidae View MSA
124069789 5270 Rosid View MSA
123743199 5271 Pentapetalae View MSA
122785867 5272 Eudicot View MSA
122047610 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.154     High High
cufflinks 4.159        
cufflinks 4.849        
cufflinks 10.264     High  
cufflinks 6.23        
cufflinks 2.942       Low
cufflinks 12.729     High  
cufflinks 5.326        
cufflinks 15.351     High High

0 Strain