Gene : Medtr2g019620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22792:SF58 - LA-RELATED PROTEIN 6A Description:  LA-related protein 6 LA RNA-binding domain protein, putative
Genomic Order:  941 Name:  ? Medtr2g019620
Secondary Identifier:  ? PAC:31062315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g019620 0.5kb upstream 0.5kb upstream 5399 true chr2: 6438490-6443888 Medicago truncatula
Medtr2g019620 0.5kb upstream 0.5kb upstream 500 false chr2: 6438490-6438989 Medicago truncatula
Medtr2g019620 0.5kb downstream 0.5kb downstream 5399 true chr2: 6438990-6444388 Medicago truncatula
Medtr2g019620 0.5kb downstream 0.5kb downstream 500 false chr2: 6443889-6444388 Medicago truncatula
Medtr2g019620 1.0kb upstream 1.0kb upstream 5899 true chr2: 6437990-6443888 Medicago truncatula
Medtr2g019620 1.0kb upstream 1.0kb upstream 1000 false chr2: 6437990-6438989 Medicago truncatula
Medtr2g019620 1.0kb downstream 1.0kb downstream 5899 true chr2: 6438990-6444888 Medicago truncatula
Medtr2g019620 1.0kb downstream 1.0kb downstream 1000 false chr2: 6443889-6444888 Medicago truncatula
Medtr2g019620 2.0kb upstream 2.0kb upstream 6899 true chr2: 6436990-6443888 Medicago truncatula
Medtr2g019620 2.0kb upstream 2.0kb upstream 2000 false chr2: 6436990-6438989 Medicago truncatula
Medtr2g019620 2.0kb downstream 2.0kb downstream 6899 true chr2: 6438990-6445888 Medicago truncatula
Medtr2g019620 2.0kb downstream 2.0kb downstream 2000 false chr2: 6443889-6445888 Medicago truncatula
Medtr2g019620 5.0kb upstream 5.0kb upstream 9899 true chr2: 6433990-6443888 Medicago truncatula
Medtr2g019620 5.0kb upstream 5.0kb upstream 5000 false chr2: 6433990-6438989 Medicago truncatula
Medtr2g019620 5.0kb downstream 5.0kb downstream 9899 true chr2: 6438990-6448888 Medicago truncatula
Medtr2g019620 5.0kb downstream 5.0kb downstream 5000 false chr2: 6443889-6448888 Medicago truncatula
Medtr2g019620 10.0kb upstream 10.0kb upstream 14899 true chr2: 6428990-6443888 Medicago truncatula
Medtr2g019620 10.0kb upstream 10.0kb upstream 10000 false chr2: 6428990-6438989 Medicago truncatula
Medtr2g019620 10.0kb downstream 10.0kb downstream 14899 true chr2: 6438990-6453888 Medicago truncatula
Medtr2g019620 10.0kb downstream 10.0kb downstream 10000 false chr2: 6443889-6453888 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305733 5265 Fabidae View MSA
124063245 5270 Rosid View MSA
123739352 5271 Pentapetalae View MSA
122791823 5272 Eudicot View MSA
122043814 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.982     High  
cufflinks 49.223     High  
cufflinks 53.22     High  
cufflinks 71.75     High  
cufflinks 42.323     High Low
cufflinks 53.494     High  
cufflinks 89.289     High High
cufflinks 41.085     High Low
cufflinks 77.0     High  

0 Strain