Gene : Medtr2g019530 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Description:  inwardly rectifying potassium channel subunit
Genomic Order:  937 Name:  ? Medtr2g019530
Secondary Identifier:  ? PAC:31067609
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g019530 0.5kb upstream 0.5kb upstream 4797 true chr2: 6384845-6389641 Medicago truncatula
Medtr2g019530 0.5kb upstream 0.5kb upstream 500 false chr2: 6389142-6389641 Medicago truncatula
Medtr2g019530 0.5kb downstream 0.5kb downstream 4797 true chr2: 6384345-6389141 Medicago truncatula
Medtr2g019530 0.5kb downstream 0.5kb downstream 500 false chr2: 6384345-6384844 Medicago truncatula
Medtr2g019530 1.0kb upstream 1.0kb upstream 5297 true chr2: 6384845-6390141 Medicago truncatula
Medtr2g019530 1.0kb upstream 1.0kb upstream 1000 false chr2: 6389142-6390141 Medicago truncatula
Medtr2g019530 1.0kb downstream 1.0kb downstream 5297 true chr2: 6383845-6389141 Medicago truncatula
Medtr2g019530 1.0kb downstream 1.0kb downstream 1000 false chr2: 6383845-6384844 Medicago truncatula
Medtr2g019530 2.0kb upstream 2.0kb upstream 6297 true chr2: 6384845-6391141 Medicago truncatula
Medtr2g019530 2.0kb upstream 2.0kb upstream 2000 false chr2: 6389142-6391141 Medicago truncatula
Medtr2g019530 2.0kb downstream 2.0kb downstream 6297 true chr2: 6382845-6389141 Medicago truncatula
Medtr2g019530 2.0kb downstream 2.0kb downstream 2000 false chr2: 6382845-6384844 Medicago truncatula
Medtr2g019530 5.0kb upstream 5.0kb upstream 9297 true chr2: 6384845-6394141 Medicago truncatula
Medtr2g019530 5.0kb upstream 5.0kb upstream 5000 false chr2: 6389142-6394141 Medicago truncatula
Medtr2g019530 5.0kb downstream 5.0kb downstream 9297 true chr2: 6379845-6389141 Medicago truncatula
Medtr2g019530 5.0kb downstream 5.0kb downstream 5000 false chr2: 6379845-6384844 Medicago truncatula
Medtr2g019530 10.0kb upstream 10.0kb upstream 14297 true chr2: 6384845-6399141 Medicago truncatula
Medtr2g019530 10.0kb upstream 10.0kb upstream 10000 false chr2: 6389142-6399141 Medicago truncatula
Medtr2g019530 10.0kb downstream 10.0kb downstream 14297 true chr2: 6374845-6389141 Medicago truncatula
Medtr2g019530 10.0kb downstream 10.0kb downstream 10000 false chr2: 6374845-6384844 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309593 5265 Fabidae View MSA
124069116 5270 Rosid View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.472        
cufflinks 6.321        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.574     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.025       Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain