Gene : Medtr2g020850 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Description:  transmembrane protein, putative
Genomic Order:  1021 Name:  ? Medtr2g020850
Secondary Identifier:  ? PAC:31063670
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g020850 0.5kb upstream 0.5kb upstream 1496 true chr2: 7008321-7009816 Medicago truncatula
Medtr2g020850 0.5kb upstream 0.5kb upstream 500 false chr2: 7008321-7008820 Medicago truncatula
Medtr2g020850 0.5kb downstream 0.5kb downstream 1496 true chr2: 7008821-7010316 Medicago truncatula
Medtr2g020850 0.5kb downstream 0.5kb downstream 500 false chr2: 7009817-7010316 Medicago truncatula
Medtr2g020850 1.0kb upstream 1.0kb upstream 1996 true chr2: 7007821-7009816 Medicago truncatula
Medtr2g020850 1.0kb upstream 1.0kb upstream 1000 false chr2: 7007821-7008820 Medicago truncatula
Medtr2g020850 1.0kb downstream 1.0kb downstream 1996 true chr2: 7008821-7010816 Medicago truncatula
Medtr2g020850 1.0kb downstream 1.0kb downstream 1000 false chr2: 7009817-7010816 Medicago truncatula
Medtr2g020850 2.0kb upstream 2.0kb upstream 2996 true chr2: 7006821-7009816 Medicago truncatula
Medtr2g020850 2.0kb upstream 2.0kb upstream 2000 false chr2: 7006821-7008820 Medicago truncatula
Medtr2g020850 2.0kb downstream 2.0kb downstream 2996 true chr2: 7008821-7011816 Medicago truncatula
Medtr2g020850 2.0kb downstream 2.0kb downstream 2000 false chr2: 7009817-7011816 Medicago truncatula
Medtr2g020850 5.0kb upstream 5.0kb upstream 5996 true chr2: 7003821-7009816 Medicago truncatula
Medtr2g020850 5.0kb upstream 5.0kb upstream 5000 false chr2: 7003821-7008820 Medicago truncatula
Medtr2g020850 5.0kb downstream 5.0kb downstream 5996 true chr2: 7008821-7014816 Medicago truncatula
Medtr2g020850 5.0kb downstream 5.0kb downstream 5000 false chr2: 7009817-7014816 Medicago truncatula
Medtr2g020850 10.0kb upstream 10.0kb upstream 10996 true chr2: 6998821-7009816 Medicago truncatula
Medtr2g020850 10.0kb upstream 10.0kb upstream 10000 false chr2: 6998821-7008820 Medicago truncatula
Medtr2g020850 10.0kb downstream 10.0kb downstream 10996 true chr2: 7008821-7019816 Medicago truncatula
Medtr2g020850 10.0kb downstream 10.0kb downstream 10000 false chr2: 7009817-7019816 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310165 5265 Fabidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.988       Low
cufflinks 2.391        
cufflinks 2.486        
cufflinks 2.529        
cufflinks 5.258       High
cufflinks 2.089        
cufflinks 2.013        
cufflinks 2.618        
cufflinks 3.462        

0 Strain