Gene : Medtr2g020310 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR15184:SF42 - ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC Description:  ATP synthase protein
Genomic Order:  984 Name:  ? Medtr2g020310
Secondary Identifier:  ? PAC:31064722
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6126 Medicago truncatula pathologic  
Mtruncatula PWY-7219 Medicago truncatula pathologic  
Mtruncatula PWY-7229 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g020310 0.5kb upstream 0.5kb upstream 1769 true chr2: 6746182-6747950 Medicago truncatula
Medtr2g020310 0.5kb upstream 0.5kb upstream 500 false chr2: 6746182-6746681 Medicago truncatula
Medtr2g020310 0.5kb downstream 0.5kb downstream 1769 true chr2: 6746682-6748450 Medicago truncatula
Medtr2g020310 0.5kb downstream 0.5kb downstream 500 false chr2: 6747951-6748450 Medicago truncatula
Medtr2g020310 1.0kb upstream 1.0kb upstream 2269 true chr2: 6745682-6747950 Medicago truncatula
Medtr2g020310 1.0kb upstream 1.0kb upstream 1000 false chr2: 6745682-6746681 Medicago truncatula
Medtr2g020310 1.0kb downstream 1.0kb downstream 2269 true chr2: 6746682-6748950 Medicago truncatula
Medtr2g020310 1.0kb downstream 1.0kb downstream 1000 false chr2: 6747951-6748950 Medicago truncatula
Medtr2g020310 2.0kb upstream 2.0kb upstream 3269 true chr2: 6744682-6747950 Medicago truncatula
Medtr2g020310 2.0kb upstream 2.0kb upstream 2000 false chr2: 6744682-6746681 Medicago truncatula
Medtr2g020310 2.0kb downstream 2.0kb downstream 3269 true chr2: 6746682-6749950 Medicago truncatula
Medtr2g020310 2.0kb downstream 2.0kb downstream 2000 false chr2: 6747951-6749950 Medicago truncatula
Medtr2g020310 5.0kb upstream 5.0kb upstream 6269 true chr2: 6741682-6747950 Medicago truncatula
Medtr2g020310 5.0kb upstream 5.0kb upstream 5000 false chr2: 6741682-6746681 Medicago truncatula
Medtr2g020310 5.0kb downstream 5.0kb downstream 6269 true chr2: 6746682-6752950 Medicago truncatula
Medtr2g020310 5.0kb downstream 5.0kb downstream 5000 false chr2: 6747951-6752950 Medicago truncatula
Medtr2g020310 10.0kb upstream 10.0kb upstream 11269 true chr2: 6736682-6747950 Medicago truncatula
Medtr2g020310 10.0kb upstream 10.0kb upstream 10000 false chr2: 6736682-6746681 Medicago truncatula
Medtr2g020310 10.0kb downstream 10.0kb downstream 11269 true chr2: 6746682-6757950 Medicago truncatula
Medtr2g020310 10.0kb downstream 10.0kb downstream 10000 false chr2: 6747951-6757950 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313766 5265 Fabidae View MSA
124036855 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.053     Low  
cufflinks 0.338        
cufflinks 0.693        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.335        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.571        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain