Gene : Medtr2g009620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR18937//PTHR18937:SF264 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Description:  viral A-type inclusion protein, putative
Genomic Order:  285 Name:  ? Medtr2g009620
Secondary Identifier:  ? PAC:31062430
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g009620 0.5kb upstream 0.5kb upstream 4675 true chr2: 1981800-1986474 Medicago truncatula
Medtr2g009620 0.5kb upstream 0.5kb upstream 500 false chr2: 1985975-1986474 Medicago truncatula
Medtr2g009620 0.5kb downstream 0.5kb downstream 4675 true chr2: 1981300-1985974 Medicago truncatula
Medtr2g009620 0.5kb downstream 0.5kb downstream 500 false chr2: 1981300-1981799 Medicago truncatula
Medtr2g009620 1.0kb upstream 1.0kb upstream 5175 true chr2: 1981800-1986974 Medicago truncatula
Medtr2g009620 1.0kb upstream 1.0kb upstream 1000 false chr2: 1985975-1986974 Medicago truncatula
Medtr2g009620 1.0kb downstream 1.0kb downstream 5175 true chr2: 1980800-1985974 Medicago truncatula
Medtr2g009620 1.0kb downstream 1.0kb downstream 1000 false chr2: 1980800-1981799 Medicago truncatula
Medtr2g009620 2.0kb upstream 2.0kb upstream 6175 true chr2: 1981800-1987974 Medicago truncatula
Medtr2g009620 2.0kb upstream 2.0kb upstream 2000 false chr2: 1985975-1987974 Medicago truncatula
Medtr2g009620 2.0kb downstream 2.0kb downstream 6175 true chr2: 1979800-1985974 Medicago truncatula
Medtr2g009620 2.0kb downstream 2.0kb downstream 2000 false chr2: 1979800-1981799 Medicago truncatula
Medtr2g009620 5.0kb upstream 5.0kb upstream 9175 true chr2: 1981800-1990974 Medicago truncatula
Medtr2g009620 5.0kb upstream 5.0kb upstream 5000 false chr2: 1985975-1990974 Medicago truncatula
Medtr2g009620 5.0kb downstream 5.0kb downstream 9175 true chr2: 1976800-1985974 Medicago truncatula
Medtr2g009620 5.0kb downstream 5.0kb downstream 5000 false chr2: 1976800-1981799 Medicago truncatula
Medtr2g009620 10.0kb upstream 10.0kb upstream 14175 true chr2: 1981800-1995974 Medicago truncatula
Medtr2g009620 10.0kb upstream 10.0kb upstream 10000 false chr2: 1985975-1995974 Medicago truncatula
Medtr2g009620 10.0kb downstream 10.0kb downstream 14175 true chr2: 1971800-1985974 Medicago truncatula
Medtr2g009620 10.0kb downstream 10.0kb downstream 10000 false chr2: 1971800-1981799 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122307170 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.145        
cufflinks 0.078        
cufflinks 0.064     Low Low
cufflinks 0.091        
cufflinks 0.064     Low Low
cufflinks 0.242       High
cufflinks 0.263       High
cufflinks 0.112        
cufflinks 0.28       High

0 Strain