Gene : Medtr2g009520 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24078//PTHR24078:SF316 - DNAJ HOMOLOG SUBFAMILY C MEMBER Description:  chaperone DnaJ-domain protein
Genomic Order:  278 Name:  ? Medtr2g009520
Secondary Identifier:  ? PAC:31064719
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g009520 0.5kb upstream 0.5kb upstream 2688 true chr2: 1948713-1951400 Medicago truncatula
Medtr2g009520 0.5kb upstream 0.5kb upstream 500 false chr2: 1950901-1951400 Medicago truncatula
Medtr2g009520 0.5kb downstream 0.5kb downstream 2688 true chr2: 1948213-1950900 Medicago truncatula
Medtr2g009520 0.5kb downstream 0.5kb downstream 500 false chr2: 1948213-1948712 Medicago truncatula
Medtr2g009520 1.0kb upstream 1.0kb upstream 3188 true chr2: 1948713-1951900 Medicago truncatula
Medtr2g009520 1.0kb upstream 1.0kb upstream 1000 false chr2: 1950901-1951900 Medicago truncatula
Medtr2g009520 1.0kb downstream 1.0kb downstream 3188 true chr2: 1947713-1950900 Medicago truncatula
Medtr2g009520 1.0kb downstream 1.0kb downstream 1000 false chr2: 1947713-1948712 Medicago truncatula
Medtr2g009520 2.0kb upstream 2.0kb upstream 4188 true chr2: 1948713-1952900 Medicago truncatula
Medtr2g009520 2.0kb upstream 2.0kb upstream 2000 false chr2: 1950901-1952900 Medicago truncatula
Medtr2g009520 2.0kb downstream 2.0kb downstream 4188 true chr2: 1946713-1950900 Medicago truncatula
Medtr2g009520 2.0kb downstream 2.0kb downstream 2000 false chr2: 1946713-1948712 Medicago truncatula
Medtr2g009520 5.0kb upstream 5.0kb upstream 7188 true chr2: 1948713-1955900 Medicago truncatula
Medtr2g009520 5.0kb upstream 5.0kb upstream 5000 false chr2: 1950901-1955900 Medicago truncatula
Medtr2g009520 5.0kb downstream 5.0kb downstream 7188 true chr2: 1943713-1950900 Medicago truncatula
Medtr2g009520 5.0kb downstream 5.0kb downstream 5000 false chr2: 1943713-1948712 Medicago truncatula
Medtr2g009520 10.0kb upstream 10.0kb upstream 12188 true chr2: 1948713-1960900 Medicago truncatula
Medtr2g009520 10.0kb upstream 10.0kb upstream 10000 false chr2: 1950901-1960900 Medicago truncatula
Medtr2g009520 10.0kb downstream 10.0kb downstream 12188 true chr2: 1938713-1950900 Medicago truncatula
Medtr2g009520 10.0kb downstream 10.0kb downstream 10000 false chr2: 1938713-1948712 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314210 5265 Fabidae View MSA
124074016 5270 Rosid View MSA
123741579 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.625        
cufflinks 2.371        
cufflinks 3.291        
cufflinks 5.133       High
cufflinks 3.9        
cufflinks 1.392       Low
cufflinks 1.705       Low
cufflinks 2.109        
cufflinks 3.921        

0 Strain