Gene : Medtr2g009270 M. truncatula Mt4.0v1
Defline:  (1 of 2) 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Description:  3,4-dihydroxy-2-butanone 4-phosphate synthase
Genomic Order:  264 Name:  ? Medtr2g009270
Secondary Identifier:  ? PAC:31066247
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula RIBOSYN2-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g009270 0.5kb upstream 0.5kb upstream 5142 true chr2: 1847520-1852661 Medicago truncatula
Medtr2g009270 0.5kb upstream 0.5kb upstream 500 false chr2: 1847520-1848019 Medicago truncatula
Medtr2g009270 0.5kb downstream 0.5kb downstream 5142 true chr2: 1848020-1853161 Medicago truncatula
Medtr2g009270 0.5kb downstream 0.5kb downstream 500 false chr2: 1852662-1853161 Medicago truncatula
Medtr2g009270 1.0kb upstream 1.0kb upstream 5642 true chr2: 1847020-1852661 Medicago truncatula
Medtr2g009270 1.0kb upstream 1.0kb upstream 1000 false chr2: 1847020-1848019 Medicago truncatula
Medtr2g009270 1.0kb downstream 1.0kb downstream 5642 true chr2: 1848020-1853661 Medicago truncatula
Medtr2g009270 1.0kb downstream 1.0kb downstream 1000 false chr2: 1852662-1853661 Medicago truncatula
Medtr2g009270 2.0kb upstream 2.0kb upstream 6642 true chr2: 1846020-1852661 Medicago truncatula
Medtr2g009270 2.0kb upstream 2.0kb upstream 2000 false chr2: 1846020-1848019 Medicago truncatula
Medtr2g009270 2.0kb downstream 2.0kb downstream 6642 true chr2: 1848020-1854661 Medicago truncatula
Medtr2g009270 2.0kb downstream 2.0kb downstream 2000 false chr2: 1852662-1854661 Medicago truncatula
Medtr2g009270 5.0kb upstream 5.0kb upstream 9642 true chr2: 1843020-1852661 Medicago truncatula
Medtr2g009270 5.0kb upstream 5.0kb upstream 5000 false chr2: 1843020-1848019 Medicago truncatula
Medtr2g009270 5.0kb downstream 5.0kb downstream 9642 true chr2: 1848020-1857661 Medicago truncatula
Medtr2g009270 5.0kb downstream 5.0kb downstream 5000 false chr2: 1852662-1857661 Medicago truncatula
Medtr2g009270 10.0kb upstream 10.0kb upstream 14642 true chr2: 1838020-1852661 Medicago truncatula
Medtr2g009270 10.0kb upstream 10.0kb upstream 10000 false chr2: 1838020-1848019 Medicago truncatula
Medtr2g009270 10.0kb downstream 10.0kb downstream 14642 true chr2: 1848020-1862661 Medicago truncatula
Medtr2g009270 10.0kb downstream 10.0kb downstream 10000 false chr2: 1852662-1862661 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
122311687 5265 Fabidae View MSA
124067680 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.899     High High
cufflinks 4.117        
cufflinks 6.005        
cufflinks 6.883        
cufflinks 3.394       Low
cufflinks 13.662     High  
cufflinks 25.92     High  
cufflinks 3.592        
cufflinks 71.3     High High

0 Strain