Gene : Medtr2g010450 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR23042:SF61 - TRANSCRIPTION FACTOR BHLH18-RELATED Description:  symbiotic ammonium transporter
Genomic Order:  345 Name:  ? Medtr2g010450
Secondary Identifier:  ? PAC:31063868
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g010450 0.5kb upstream 0.5kb upstream 3327 true chr2: 2375160-2378486 Medicago truncatula
Medtr2g010450 0.5kb upstream 0.5kb upstream 500 false chr2: 2375160-2375659 Medicago truncatula
Medtr2g010450 0.5kb downstream 0.5kb downstream 3327 true chr2: 2375660-2378986 Medicago truncatula
Medtr2g010450 0.5kb downstream 0.5kb downstream 500 false chr2: 2378487-2378986 Medicago truncatula
Medtr2g010450 1.0kb upstream 1.0kb upstream 3827 true chr2: 2374660-2378486 Medicago truncatula
Medtr2g010450 1.0kb upstream 1.0kb upstream 1000 false chr2: 2374660-2375659 Medicago truncatula
Medtr2g010450 1.0kb downstream 1.0kb downstream 3827 true chr2: 2375660-2379486 Medicago truncatula
Medtr2g010450 1.0kb downstream 1.0kb downstream 1000 false chr2: 2378487-2379486 Medicago truncatula
Medtr2g010450 2.0kb upstream 2.0kb upstream 4827 true chr2: 2373660-2378486 Medicago truncatula
Medtr2g010450 2.0kb upstream 2.0kb upstream 2000 false chr2: 2373660-2375659 Medicago truncatula
Medtr2g010450 2.0kb downstream 2.0kb downstream 4827 true chr2: 2375660-2380486 Medicago truncatula
Medtr2g010450 2.0kb downstream 2.0kb downstream 2000 false chr2: 2378487-2380486 Medicago truncatula
Medtr2g010450 5.0kb upstream 5.0kb upstream 7827 true chr2: 2370660-2378486 Medicago truncatula
Medtr2g010450 5.0kb upstream 5.0kb upstream 5000 false chr2: 2370660-2375659 Medicago truncatula
Medtr2g010450 5.0kb downstream 5.0kb downstream 7827 true chr2: 2375660-2383486 Medicago truncatula
Medtr2g010450 5.0kb downstream 5.0kb downstream 5000 false chr2: 2378487-2383486 Medicago truncatula
Medtr2g010450 10.0kb upstream 10.0kb upstream 12827 true chr2: 2365660-2378486 Medicago truncatula
Medtr2g010450 10.0kb upstream 10.0kb upstream 10000 false chr2: 2365660-2375659 Medicago truncatula
Medtr2g010450 10.0kb downstream 10.0kb downstream 12827 true chr2: 2375660-2388486 Medicago truncatula
Medtr2g010450 10.0kb downstream 10.0kb downstream 10000 false chr2: 2378487-2388486 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314925 5265 Fabidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.332        
cufflinks 0.072        
cufflinks 0.051     Low  
cufflinks 0.694       High
cufflinks 0.033     Low Low
cufflinks 0.956       High
cufflinks 0.158        
cufflinks 0.04     Low Low
cufflinks 0.576        

0 Strain