Gene : Medtr2g010120 M. truncatula Mt4.0v1
Defline:  (1 of 12) PF12734 - Cysteine-rich TM module stress tolerance (CYSTM) Description:  cysteine-rich TM module stress tolerance protein
Genomic Order:  322 Name:  ? Medtr2g010120
Secondary Identifier:  ? PAC:31063945
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g010120 0.5kb upstream 0.5kb upstream 1426 true chr2: 2236786-2238211 Medicago truncatula
Medtr2g010120 0.5kb upstream 0.5kb upstream 500 false chr2: 2237712-2238211 Medicago truncatula
Medtr2g010120 0.5kb downstream 0.5kb downstream 1426 true chr2: 2236286-2237711 Medicago truncatula
Medtr2g010120 0.5kb downstream 0.5kb downstream 500 false chr2: 2236286-2236785 Medicago truncatula
Medtr2g010120 1.0kb upstream 1.0kb upstream 1926 true chr2: 2236786-2238711 Medicago truncatula
Medtr2g010120 1.0kb upstream 1.0kb upstream 1000 false chr2: 2237712-2238711 Medicago truncatula
Medtr2g010120 1.0kb downstream 1.0kb downstream 1926 true chr2: 2235786-2237711 Medicago truncatula
Medtr2g010120 1.0kb downstream 1.0kb downstream 1000 false chr2: 2235786-2236785 Medicago truncatula
Medtr2g010120 2.0kb upstream 2.0kb upstream 2926 true chr2: 2236786-2239711 Medicago truncatula
Medtr2g010120 2.0kb upstream 2.0kb upstream 2000 false chr2: 2237712-2239711 Medicago truncatula
Medtr2g010120 2.0kb downstream 2.0kb downstream 2926 true chr2: 2234786-2237711 Medicago truncatula
Medtr2g010120 2.0kb downstream 2.0kb downstream 2000 false chr2: 2234786-2236785 Medicago truncatula
Medtr2g010120 5.0kb upstream 5.0kb upstream 5926 true chr2: 2236786-2242711 Medicago truncatula
Medtr2g010120 5.0kb upstream 5.0kb upstream 5000 false chr2: 2237712-2242711 Medicago truncatula
Medtr2g010120 5.0kb downstream 5.0kb downstream 5926 true chr2: 2231786-2237711 Medicago truncatula
Medtr2g010120 5.0kb downstream 5.0kb downstream 5000 false chr2: 2231786-2236785 Medicago truncatula
Medtr2g010120 10.0kb upstream 10.0kb upstream 10926 true chr2: 2236786-2247711 Medicago truncatula
Medtr2g010120 10.0kb upstream 10.0kb upstream 10000 false chr2: 2237712-2247711 Medicago truncatula
Medtr2g010120 10.0kb downstream 10.0kb downstream 10926 true chr2: 2226786-2237711 Medicago truncatula
Medtr2g010120 10.0kb downstream 10.0kb downstream 10000 false chr2: 2226786-2236785 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026920 5273 Angiosperm View MSA
122311265 5265 Fabidae View MSA
124069872 5270 Rosid View MSA
123744649 5271 Pentapetalae View MSA
122794979 5272 Eudicot View MSA
121348545 5274 Embryophyte View MSA
123380908 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.891       Low
cufflinks 5.079        
cufflinks 5.609        
cufflinks 23.815     High High
cufflinks 7.019        
cufflinks 31.428     High High
cufflinks 13.195     High  
cufflinks 5.421        
cufflinks 17.232     High  

0 Strain