Gene : Medtr2g011730 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT Description:  NAD(P)H dehydrogenase B2
Genomic Order:  443 Name:  ? Medtr2g011730
Secondary Identifier:  ? PAC:31062053
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7279 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g011730 0.5kb upstream 0.5kb upstream 5880 true chr2: 2921774-2927653 Medicago truncatula
Medtr2g011730 0.5kb upstream 0.5kb upstream 500 false chr2: 2927154-2927653 Medicago truncatula
Medtr2g011730 0.5kb downstream 0.5kb downstream 5880 true chr2: 2921274-2927153 Medicago truncatula
Medtr2g011730 0.5kb downstream 0.5kb downstream 500 false chr2: 2921274-2921773 Medicago truncatula
Medtr2g011730 1.0kb upstream 1.0kb upstream 6380 true chr2: 2921774-2928153 Medicago truncatula
Medtr2g011730 1.0kb upstream 1.0kb upstream 1000 false chr2: 2927154-2928153 Medicago truncatula
Medtr2g011730 1.0kb downstream 1.0kb downstream 6380 true chr2: 2920774-2927153 Medicago truncatula
Medtr2g011730 1.0kb downstream 1.0kb downstream 1000 false chr2: 2920774-2921773 Medicago truncatula
Medtr2g011730 2.0kb upstream 2.0kb upstream 7380 true chr2: 2921774-2929153 Medicago truncatula
Medtr2g011730 2.0kb upstream 2.0kb upstream 2000 false chr2: 2927154-2929153 Medicago truncatula
Medtr2g011730 2.0kb downstream 2.0kb downstream 7380 true chr2: 2919774-2927153 Medicago truncatula
Medtr2g011730 2.0kb downstream 2.0kb downstream 2000 false chr2: 2919774-2921773 Medicago truncatula
Medtr2g011730 5.0kb upstream 5.0kb upstream 10380 true chr2: 2921774-2932153 Medicago truncatula
Medtr2g011730 5.0kb upstream 5.0kb upstream 5000 false chr2: 2927154-2932153 Medicago truncatula
Medtr2g011730 5.0kb downstream 5.0kb downstream 10380 true chr2: 2916774-2927153 Medicago truncatula
Medtr2g011730 5.0kb downstream 5.0kb downstream 5000 false chr2: 2916774-2921773 Medicago truncatula
Medtr2g011730 10.0kb upstream 10.0kb upstream 15380 true chr2: 2921774-2937153 Medicago truncatula
Medtr2g011730 10.0kb upstream 10.0kb upstream 10000 false chr2: 2927154-2937153 Medicago truncatula
Medtr2g011730 10.0kb downstream 10.0kb downstream 15380 true chr2: 2911774-2927153 Medicago truncatula
Medtr2g011730 10.0kb downstream 10.0kb downstream 10000 false chr2: 2911774-2921773 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313743 5265 Fabidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034     Low Low
cufflinks 0.137        
cufflinks 0.134        
cufflinks 0.071        
cufflinks 0.86       High
cufflinks 0.6        
cufflinks 0.645        
cufflinks 0.118        
cufflinks 0.455        

0 Strain