Gene : Medtr2g011940 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23336:SF10 - B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-RELATED Description:  AP2/B3 transcription factor family protein
Genomic Order:  452 Name:  ? Medtr2g011940
Secondary Identifier:  ? PAC:31062168
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g011940 0.5kb upstream 0.5kb upstream 11117 true chr2: 3002112-3013228 Medicago truncatula
Medtr2g011940 0.5kb upstream 0.5kb upstream 500 false chr2: 3002112-3002611 Medicago truncatula
Medtr2g011940 0.5kb downstream 0.5kb downstream 11117 true chr2: 3002612-3013728 Medicago truncatula
Medtr2g011940 0.5kb downstream 0.5kb downstream 500 false chr2: 3013229-3013728 Medicago truncatula
Medtr2g011940 1.0kb upstream 1.0kb upstream 11617 true chr2: 3001612-3013228 Medicago truncatula
Medtr2g011940 1.0kb upstream 1.0kb upstream 1000 false chr2: 3001612-3002611 Medicago truncatula
Medtr2g011940 1.0kb downstream 1.0kb downstream 11617 true chr2: 3002612-3014228 Medicago truncatula
Medtr2g011940 1.0kb downstream 1.0kb downstream 1000 false chr2: 3013229-3014228 Medicago truncatula
Medtr2g011940 2.0kb upstream 2.0kb upstream 12617 true chr2: 3000612-3013228 Medicago truncatula
Medtr2g011940 2.0kb upstream 2.0kb upstream 2000 false chr2: 3000612-3002611 Medicago truncatula
Medtr2g011940 2.0kb downstream 2.0kb downstream 12617 true chr2: 3002612-3015228 Medicago truncatula
Medtr2g011940 2.0kb downstream 2.0kb downstream 2000 false chr2: 3013229-3015228 Medicago truncatula
Medtr2g011940 5.0kb upstream 5.0kb upstream 15617 true chr2: 2997612-3013228 Medicago truncatula
Medtr2g011940 5.0kb upstream 5.0kb upstream 5000 false chr2: 2997612-3002611 Medicago truncatula
Medtr2g011940 5.0kb downstream 5.0kb downstream 15617 true chr2: 3002612-3018228 Medicago truncatula
Medtr2g011940 5.0kb downstream 5.0kb downstream 5000 false chr2: 3013229-3018228 Medicago truncatula
Medtr2g011940 10.0kb upstream 10.0kb upstream 20617 true chr2: 2992612-3013228 Medicago truncatula
Medtr2g011940 10.0kb upstream 10.0kb upstream 10000 false chr2: 2992612-3002611 Medicago truncatula
Medtr2g011940 10.0kb downstream 10.0kb downstream 20617 true chr2: 3002612-3023228 Medicago truncatula
Medtr2g011940 10.0kb downstream 10.0kb downstream 10000 false chr2: 3013229-3023228 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303955 5265 Fabidae View MSA
124061756 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.33        
cufflinks 0.522        
cufflinks 0.508        
cufflinks 0.359        
cufflinks 0.531        
cufflinks 0.039     Low Low
cufflinks 0.459        
cufflinks 0.483        
cufflinks 0.464        

0 Strain