Gene : Medtr2g011420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12931 - UBIQUITIN THIOLESTERASE PROTEIN OTUB Description:  otubain-like cysteine protease, putative
Genomic Order:  419 Name:  ? Medtr2g011420
Secondary Identifier:  ? PAC:31065994
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g011420 0.5kb upstream 0.5kb upstream 6480 true chr2: 2769340-2775819 Medicago truncatula
Medtr2g011420 0.5kb upstream 0.5kb upstream 500 false chr2: 2775320-2775819 Medicago truncatula
Medtr2g011420 0.5kb downstream 0.5kb downstream 6480 true chr2: 2768840-2775319 Medicago truncatula
Medtr2g011420 0.5kb downstream 0.5kb downstream 500 false chr2: 2768840-2769339 Medicago truncatula
Medtr2g011420 1.0kb upstream 1.0kb upstream 6980 true chr2: 2769340-2776319 Medicago truncatula
Medtr2g011420 1.0kb upstream 1.0kb upstream 1000 false chr2: 2775320-2776319 Medicago truncatula
Medtr2g011420 1.0kb downstream 1.0kb downstream 6980 true chr2: 2768340-2775319 Medicago truncatula
Medtr2g011420 1.0kb downstream 1.0kb downstream 1000 false chr2: 2768340-2769339 Medicago truncatula
Medtr2g011420 2.0kb upstream 2.0kb upstream 7980 true chr2: 2769340-2777319 Medicago truncatula
Medtr2g011420 2.0kb upstream 2.0kb upstream 2000 false chr2: 2775320-2777319 Medicago truncatula
Medtr2g011420 2.0kb downstream 2.0kb downstream 7980 true chr2: 2767340-2775319 Medicago truncatula
Medtr2g011420 2.0kb downstream 2.0kb downstream 2000 false chr2: 2767340-2769339 Medicago truncatula
Medtr2g011420 5.0kb upstream 5.0kb upstream 10980 true chr2: 2769340-2780319 Medicago truncatula
Medtr2g011420 5.0kb upstream 5.0kb upstream 5000 false chr2: 2775320-2780319 Medicago truncatula
Medtr2g011420 5.0kb downstream 5.0kb downstream 10980 true chr2: 2764340-2775319 Medicago truncatula
Medtr2g011420 5.0kb downstream 5.0kb downstream 5000 false chr2: 2764340-2769339 Medicago truncatula
Medtr2g011420 10.0kb upstream 10.0kb upstream 15980 true chr2: 2769340-2785319 Medicago truncatula
Medtr2g011420 10.0kb upstream 10.0kb upstream 10000 false chr2: 2775320-2785319 Medicago truncatula
Medtr2g011420 10.0kb downstream 10.0kb downstream 15980 true chr2: 2759340-2775319 Medicago truncatula
Medtr2g011420 10.0kb downstream 10.0kb downstream 10000 false chr2: 2759340-2769339 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300395 5265 Fabidae View MSA
124065600 5270 Rosid View MSA
123752549 5271 Pentapetalae View MSA
122787068 5272 Eudicot View MSA
122043006 5273 Angiosperm View MSA
121344850 5274 Embryophyte View MSA
123424451 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.249        
cufflinks 1.862        
cufflinks 1.873        
cufflinks 1.494        
cufflinks 3.012       High
cufflinks 0.501       Low
cufflinks 1.527        
cufflinks 1.795        
cufflinks 2.864        

0 Strain