Gene : Medtr2g013220 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10639:SF7 - CLATHRIN LIGHT CHAIN Description:  clathrin light chain-like protein
Genomic Order:  528 Name:  ? Medtr2g013220
Secondary Identifier:  ? PAC:31068274
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013220 0.5kb upstream 0.5kb upstream 4756 true chr2: 3522489-3527244 Medicago truncatula
Medtr2g013220 0.5kb upstream 0.5kb upstream 500 false chr2: 3526745-3527244 Medicago truncatula
Medtr2g013220 0.5kb downstream 0.5kb downstream 4756 true chr2: 3521989-3526744 Medicago truncatula
Medtr2g013220 0.5kb downstream 0.5kb downstream 500 false chr2: 3521989-3522488 Medicago truncatula
Medtr2g013220 1.0kb upstream 1.0kb upstream 5256 true chr2: 3522489-3527744 Medicago truncatula
Medtr2g013220 1.0kb upstream 1.0kb upstream 1000 false chr2: 3526745-3527744 Medicago truncatula
Medtr2g013220 1.0kb downstream 1.0kb downstream 5256 true chr2: 3521489-3526744 Medicago truncatula
Medtr2g013220 1.0kb downstream 1.0kb downstream 1000 false chr2: 3521489-3522488 Medicago truncatula
Medtr2g013220 2.0kb upstream 2.0kb upstream 6256 true chr2: 3522489-3528744 Medicago truncatula
Medtr2g013220 2.0kb upstream 2.0kb upstream 2000 false chr2: 3526745-3528744 Medicago truncatula
Medtr2g013220 2.0kb downstream 2.0kb downstream 6256 true chr2: 3520489-3526744 Medicago truncatula
Medtr2g013220 2.0kb downstream 2.0kb downstream 2000 false chr2: 3520489-3522488 Medicago truncatula
Medtr2g013220 5.0kb upstream 5.0kb upstream 9256 true chr2: 3522489-3531744 Medicago truncatula
Medtr2g013220 5.0kb upstream 5.0kb upstream 5000 false chr2: 3526745-3531744 Medicago truncatula
Medtr2g013220 5.0kb downstream 5.0kb downstream 9256 true chr2: 3517489-3526744 Medicago truncatula
Medtr2g013220 5.0kb downstream 5.0kb downstream 5000 false chr2: 3517489-3522488 Medicago truncatula
Medtr2g013220 10.0kb upstream 10.0kb upstream 14256 true chr2: 3522489-3536744 Medicago truncatula
Medtr2g013220 10.0kb upstream 10.0kb upstream 10000 false chr2: 3526745-3536744 Medicago truncatula
Medtr2g013220 10.0kb downstream 10.0kb downstream 14256 true chr2: 3512489-3526744 Medicago truncatula
Medtr2g013220 10.0kb downstream 10.0kb downstream 10000 false chr2: 3512489-3522488 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300779 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.303     High  
cufflinks 19.422     High  
cufflinks 12.853     High  
cufflinks 23.515     High  
cufflinks 17.47     High  
cufflinks 10.529     High Low
cufflinks 17.837     High  
cufflinks 12.738     High  
cufflinks 30.279     High High

0 Strain