Gene : Medtr2g013110 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13780:SF39 - CBS DOMAIN-CONTAINING PROTEIN-RELATED Description:  CBS domain CBSX5-like protein
Genomic Order:  518 Name:  ? Medtr2g013110
Secondary Identifier:  ? PAC:31062070
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013110 0.5kb upstream 0.5kb upstream 2538 true chr2: 3467951-3470488 Medicago truncatula
Medtr2g013110 0.5kb upstream 0.5kb upstream 500 false chr2: 3469989-3470488 Medicago truncatula
Medtr2g013110 0.5kb downstream 0.5kb downstream 2538 true chr2: 3467451-3469988 Medicago truncatula
Medtr2g013110 0.5kb downstream 0.5kb downstream 500 false chr2: 3467451-3467950 Medicago truncatula
Medtr2g013110 1.0kb upstream 1.0kb upstream 3038 true chr2: 3467951-3470988 Medicago truncatula
Medtr2g013110 1.0kb upstream 1.0kb upstream 1000 false chr2: 3469989-3470988 Medicago truncatula
Medtr2g013110 1.0kb downstream 1.0kb downstream 3038 true chr2: 3466951-3469988 Medicago truncatula
Medtr2g013110 1.0kb downstream 1.0kb downstream 1000 false chr2: 3466951-3467950 Medicago truncatula
Medtr2g013110 2.0kb upstream 2.0kb upstream 4038 true chr2: 3467951-3471988 Medicago truncatula
Medtr2g013110 2.0kb upstream 2.0kb upstream 2000 false chr2: 3469989-3471988 Medicago truncatula
Medtr2g013110 2.0kb downstream 2.0kb downstream 4038 true chr2: 3465951-3469988 Medicago truncatula
Medtr2g013110 2.0kb downstream 2.0kb downstream 2000 false chr2: 3465951-3467950 Medicago truncatula
Medtr2g013110 5.0kb upstream 5.0kb upstream 7038 true chr2: 3467951-3474988 Medicago truncatula
Medtr2g013110 5.0kb upstream 5.0kb upstream 5000 false chr2: 3469989-3474988 Medicago truncatula
Medtr2g013110 5.0kb downstream 5.0kb downstream 7038 true chr2: 3462951-3469988 Medicago truncatula
Medtr2g013110 5.0kb downstream 5.0kb downstream 5000 false chr2: 3462951-3467950 Medicago truncatula
Medtr2g013110 10.0kb upstream 10.0kb upstream 12038 true chr2: 3467951-3479988 Medicago truncatula
Medtr2g013110 10.0kb upstream 10.0kb upstream 10000 false chr2: 3469989-3479988 Medicago truncatula
Medtr2g013110 10.0kb downstream 10.0kb downstream 12038 true chr2: 3457951-3469988 Medicago truncatula
Medtr2g013110 10.0kb downstream 10.0kb downstream 10000 false chr2: 3457951-3467950 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301461 5265 Fabidae View MSA
124069428 5270 Rosid View MSA
123752879 5271 Pentapetalae View MSA
122796215 5272 Eudicot View MSA
122042331 5273 Angiosperm View MSA
121351611 5274 Embryophyte View MSA
123382245 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.121        
cufflinks 1.773        
cufflinks 1.381        
cufflinks 1.231        
cufflinks 1.945        
cufflinks 0.756       Low
cufflinks 2.52       High
cufflinks 1.215        
cufflinks 2.961       High

0 Strain