Gene : Medtr2g013070 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12879 - SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2 Description:  sphingolipid delta desaturase
Genomic Order:  516 Name:  ? Medtr2g013070
Secondary Identifier:  ? PAC:31064630
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013070 0.5kb upstream 0.5kb upstream 2740 true chr2: 3450592-3453331 Medicago truncatula
Medtr2g013070 0.5kb upstream 0.5kb upstream 500 false chr2: 3452832-3453331 Medicago truncatula
Medtr2g013070 0.5kb downstream 0.5kb downstream 2740 true chr2: 3450092-3452831 Medicago truncatula
Medtr2g013070 0.5kb downstream 0.5kb downstream 500 false chr2: 3450092-3450591 Medicago truncatula
Medtr2g013070 1.0kb upstream 1.0kb upstream 3240 true chr2: 3450592-3453831 Medicago truncatula
Medtr2g013070 1.0kb upstream 1.0kb upstream 1000 false chr2: 3452832-3453831 Medicago truncatula
Medtr2g013070 1.0kb downstream 1.0kb downstream 3240 true chr2: 3449592-3452831 Medicago truncatula
Medtr2g013070 1.0kb downstream 1.0kb downstream 1000 false chr2: 3449592-3450591 Medicago truncatula
Medtr2g013070 2.0kb upstream 2.0kb upstream 4240 true chr2: 3450592-3454831 Medicago truncatula
Medtr2g013070 2.0kb upstream 2.0kb upstream 2000 false chr2: 3452832-3454831 Medicago truncatula
Medtr2g013070 2.0kb downstream 2.0kb downstream 4240 true chr2: 3448592-3452831 Medicago truncatula
Medtr2g013070 2.0kb downstream 2.0kb downstream 2000 false chr2: 3448592-3450591 Medicago truncatula
Medtr2g013070 5.0kb upstream 5.0kb upstream 7240 true chr2: 3450592-3457831 Medicago truncatula
Medtr2g013070 5.0kb upstream 5.0kb upstream 5000 false chr2: 3452832-3457831 Medicago truncatula
Medtr2g013070 5.0kb downstream 5.0kb downstream 7240 true chr2: 3445592-3452831 Medicago truncatula
Medtr2g013070 5.0kb downstream 5.0kb downstream 5000 false chr2: 3445592-3450591 Medicago truncatula
Medtr2g013070 10.0kb upstream 10.0kb upstream 12240 true chr2: 3450592-3462831 Medicago truncatula
Medtr2g013070 10.0kb upstream 10.0kb upstream 10000 false chr2: 3452832-3462831 Medicago truncatula
Medtr2g013070 10.0kb downstream 10.0kb downstream 12240 true chr2: 3440592-3452831 Medicago truncatula
Medtr2g013070 10.0kb downstream 10.0kb downstream 10000 false chr2: 3440592-3450591 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305345 5265 Fabidae View MSA
124069384 5270 Rosid View MSA
123741944 5271 Pentapetalae View MSA
122796748 5272 Eudicot View MSA
122048709 5273 Angiosperm View MSA
121348431 5274 Embryophyte View MSA
123425717 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.74        
cufflinks 0.771        
cufflinks 1.081        
cufflinks 1.884        
cufflinks 1.608        
cufflinks 0.027     Low Low
cufflinks 4.399        
cufflinks 0.882        
cufflinks 3.465        

0 Strain