Gene : Medtr2g012990 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31008:SF6 - CSL1 Description:  TIR class disease resistance protein
Genomic Order:  511 Name:  ? Medtr2g012990
Secondary Identifier:  ? PAC:31067615
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g012990 0.5kb upstream 0.5kb upstream 5337 true chr2: 3414574-3419910 Medicago truncatula
Medtr2g012990 0.5kb upstream 0.5kb upstream 500 false chr2: 3414574-3415073 Medicago truncatula
Medtr2g012990 0.5kb downstream 0.5kb downstream 5337 true chr2: 3415074-3420410 Medicago truncatula
Medtr2g012990 0.5kb downstream 0.5kb downstream 500 false chr2: 3419911-3420410 Medicago truncatula
Medtr2g012990 1.0kb upstream 1.0kb upstream 5837 true chr2: 3414074-3419910 Medicago truncatula
Medtr2g012990 1.0kb upstream 1.0kb upstream 1000 false chr2: 3414074-3415073 Medicago truncatula
Medtr2g012990 1.0kb downstream 1.0kb downstream 5837 true chr2: 3415074-3420910 Medicago truncatula
Medtr2g012990 1.0kb downstream 1.0kb downstream 1000 false chr2: 3419911-3420910 Medicago truncatula
Medtr2g012990 2.0kb upstream 2.0kb upstream 6837 true chr2: 3413074-3419910 Medicago truncatula
Medtr2g012990 2.0kb upstream 2.0kb upstream 2000 false chr2: 3413074-3415073 Medicago truncatula
Medtr2g012990 2.0kb downstream 2.0kb downstream 6837 true chr2: 3415074-3421910 Medicago truncatula
Medtr2g012990 2.0kb downstream 2.0kb downstream 2000 false chr2: 3419911-3421910 Medicago truncatula
Medtr2g012990 5.0kb upstream 5.0kb upstream 9837 true chr2: 3410074-3419910 Medicago truncatula
Medtr2g012990 5.0kb upstream 5.0kb upstream 5000 false chr2: 3410074-3415073 Medicago truncatula
Medtr2g012990 5.0kb downstream 5.0kb downstream 9837 true chr2: 3415074-3424910 Medicago truncatula
Medtr2g012990 5.0kb downstream 5.0kb downstream 5000 false chr2: 3419911-3424910 Medicago truncatula
Medtr2g012990 10.0kb upstream 10.0kb upstream 14837 true chr2: 3405074-3419910 Medicago truncatula
Medtr2g012990 10.0kb upstream 10.0kb upstream 10000 false chr2: 3405074-3415073 Medicago truncatula
Medtr2g012990 10.0kb downstream 10.0kb downstream 14837 true chr2: 3415074-3429910 Medicago truncatula
Medtr2g012990 10.0kb downstream 10.0kb downstream 10000 false chr2: 3419911-3429910 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311812 5265 Fabidae View MSA
124066704 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.8        
cufflinks 8.036       High
cufflinks 5.884        
cufflinks 0.977       Low
cufflinks 8.78       High
cufflinks 1.609        
cufflinks 1.5        
cufflinks 5.688        
cufflinks 1.694        

0 Strain