Gene : Medtr2g013000 M. truncatula Mt4.0v1
Description:  hydroxyproline-rich glycoprotein family protein, putative Genomic Order:  512
Name:  ? Medtr2g013000 Secondary Identifier:  ? PAC:31066262
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013000 0.5kb upstream 0.5kb upstream 3473 true chr2: 3421500-3424972 Medicago truncatula
Medtr2g013000 0.5kb upstream 0.5kb upstream 500 false chr2: 3421500-3421999 Medicago truncatula
Medtr2g013000 0.5kb downstream 0.5kb downstream 3473 true chr2: 3422000-3425472 Medicago truncatula
Medtr2g013000 0.5kb downstream 0.5kb downstream 500 false chr2: 3424973-3425472 Medicago truncatula
Medtr2g013000 1.0kb upstream 1.0kb upstream 3973 true chr2: 3421000-3424972 Medicago truncatula
Medtr2g013000 1.0kb upstream 1.0kb upstream 1000 false chr2: 3421000-3421999 Medicago truncatula
Medtr2g013000 1.0kb downstream 1.0kb downstream 3973 true chr2: 3422000-3425972 Medicago truncatula
Medtr2g013000 1.0kb downstream 1.0kb downstream 1000 false chr2: 3424973-3425972 Medicago truncatula
Medtr2g013000 2.0kb upstream 2.0kb upstream 4973 true chr2: 3420000-3424972 Medicago truncatula
Medtr2g013000 2.0kb upstream 2.0kb upstream 2000 false chr2: 3420000-3421999 Medicago truncatula
Medtr2g013000 2.0kb downstream 2.0kb downstream 4973 true chr2: 3422000-3426972 Medicago truncatula
Medtr2g013000 2.0kb downstream 2.0kb downstream 2000 false chr2: 3424973-3426972 Medicago truncatula
Medtr2g013000 5.0kb upstream 5.0kb upstream 7973 true chr2: 3417000-3424972 Medicago truncatula
Medtr2g013000 5.0kb upstream 5.0kb upstream 5000 false chr2: 3417000-3421999 Medicago truncatula
Medtr2g013000 5.0kb downstream 5.0kb downstream 7973 true chr2: 3422000-3429972 Medicago truncatula
Medtr2g013000 5.0kb downstream 5.0kb downstream 5000 false chr2: 3424973-3429972 Medicago truncatula
Medtr2g013000 10.0kb upstream 10.0kb upstream 12973 true chr2: 3412000-3424972 Medicago truncatula
Medtr2g013000 10.0kb upstream 10.0kb upstream 10000 false chr2: 3412000-3421999 Medicago truncatula
Medtr2g013000 10.0kb downstream 10.0kb downstream 12973 true chr2: 3422000-3434972 Medicago truncatula
Medtr2g013000 10.0kb downstream 10.0kb downstream 10000 false chr2: 3424973-3434972 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296673 5265 Fabidae View MSA
124069520 5270 Rosid View MSA
123747177 5271 Pentapetalae View MSA
122796256 5272 Eudicot View MSA
122048437 5273 Angiosperm View MSA
121310973 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.17        
cufflinks 0.013     Low  
cufflinks 0.013     Low  
cufflinks 0.04     Low  
cufflinks 0.015     Low  
cufflinks 0.527       High
cufflinks 0.419       High
cufflinks 0.017     Low  
cufflinks 0.385       High

0 Strain