Gene : Medtr2g012810 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF08513//PF10607 - LisH (LisH) // CTLH/CRA C-terminal to LisH motif domain (CLTH) Description:  LisH and RanBPM domain protein
Genomic Order:  497 Name:  ? Medtr2g012810
Secondary Identifier:  ? PAC:31068983
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g012810 0.5kb upstream 0.5kb upstream 6097 true chr2: 3301342-3307438 Medicago truncatula
Medtr2g012810 0.5kb upstream 0.5kb upstream 500 false chr2: 3306939-3307438 Medicago truncatula
Medtr2g012810 0.5kb downstream 0.5kb downstream 6097 true chr2: 3300842-3306938 Medicago truncatula
Medtr2g012810 0.5kb downstream 0.5kb downstream 500 false chr2: 3300842-3301341 Medicago truncatula
Medtr2g012810 1.0kb upstream 1.0kb upstream 6597 true chr2: 3301342-3307938 Medicago truncatula
Medtr2g012810 1.0kb upstream 1.0kb upstream 1000 false chr2: 3306939-3307938 Medicago truncatula
Medtr2g012810 1.0kb downstream 1.0kb downstream 6597 true chr2: 3300342-3306938 Medicago truncatula
Medtr2g012810 1.0kb downstream 1.0kb downstream 1000 false chr2: 3300342-3301341 Medicago truncatula
Medtr2g012810 2.0kb upstream 2.0kb upstream 7597 true chr2: 3301342-3308938 Medicago truncatula
Medtr2g012810 2.0kb upstream 2.0kb upstream 2000 false chr2: 3306939-3308938 Medicago truncatula
Medtr2g012810 2.0kb downstream 2.0kb downstream 7597 true chr2: 3299342-3306938 Medicago truncatula
Medtr2g012810 2.0kb downstream 2.0kb downstream 2000 false chr2: 3299342-3301341 Medicago truncatula
Medtr2g012810 5.0kb upstream 5.0kb upstream 10597 true chr2: 3301342-3311938 Medicago truncatula
Medtr2g012810 5.0kb upstream 5.0kb upstream 5000 false chr2: 3306939-3311938 Medicago truncatula
Medtr2g012810 5.0kb downstream 5.0kb downstream 10597 true chr2: 3296342-3306938 Medicago truncatula
Medtr2g012810 5.0kb downstream 5.0kb downstream 5000 false chr2: 3296342-3301341 Medicago truncatula
Medtr2g012810 10.0kb upstream 10.0kb upstream 15597 true chr2: 3301342-3316938 Medicago truncatula
Medtr2g012810 10.0kb upstream 10.0kb upstream 10000 false chr2: 3306939-3316938 Medicago truncatula
Medtr2g012810 10.0kb downstream 10.0kb downstream 15597 true chr2: 3291342-3306938 Medicago truncatula
Medtr2g012810 10.0kb downstream 10.0kb downstream 10000 false chr2: 3291342-3301341 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314976 5265 Fabidae View MSA
124050830 5270 Rosid View MSA
123749928 5271 Pentapetalae View MSA
122788874 5272 Eudicot View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.953       Low
cufflinks 2.886        
cufflinks 2.846        
cufflinks 2.853        
cufflinks 3.554       High
cufflinks 2.395        
cufflinks 2.818        
cufflinks 2.532        
cufflinks 3.196        

0 Strain