Gene : Medtr2g013950 M. truncatula Mt4.0v1
Defline:  (1 of 35) PF05678 - VQ motif (VQ) Description:  VQ motif protein
Genomic Order:  569 Name:  ? Medtr2g013950
Secondary Identifier:  ? PAC:31069150
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013950 0.5kb upstream 0.5kb upstream 1585 true chr2: 3839231-3840815 Medicago truncatula
Medtr2g013950 0.5kb upstream 0.5kb upstream 500 false chr2: 3839231-3839730 Medicago truncatula
Medtr2g013950 0.5kb downstream 0.5kb downstream 1585 true chr2: 3839731-3841315 Medicago truncatula
Medtr2g013950 0.5kb downstream 0.5kb downstream 500 false chr2: 3840816-3841315 Medicago truncatula
Medtr2g013950 1.0kb upstream 1.0kb upstream 2085 true chr2: 3838731-3840815 Medicago truncatula
Medtr2g013950 1.0kb upstream 1.0kb upstream 1000 false chr2: 3838731-3839730 Medicago truncatula
Medtr2g013950 1.0kb downstream 1.0kb downstream 2085 true chr2: 3839731-3841815 Medicago truncatula
Medtr2g013950 1.0kb downstream 1.0kb downstream 1000 false chr2: 3840816-3841815 Medicago truncatula
Medtr2g013950 2.0kb upstream 2.0kb upstream 3085 true chr2: 3837731-3840815 Medicago truncatula
Medtr2g013950 2.0kb upstream 2.0kb upstream 2000 false chr2: 3837731-3839730 Medicago truncatula
Medtr2g013950 2.0kb downstream 2.0kb downstream 3085 true chr2: 3839731-3842815 Medicago truncatula
Medtr2g013950 2.0kb downstream 2.0kb downstream 2000 false chr2: 3840816-3842815 Medicago truncatula
Medtr2g013950 5.0kb upstream 5.0kb upstream 6085 true chr2: 3834731-3840815 Medicago truncatula
Medtr2g013950 5.0kb upstream 5.0kb upstream 5000 false chr2: 3834731-3839730 Medicago truncatula
Medtr2g013950 5.0kb downstream 5.0kb downstream 6085 true chr2: 3839731-3845815 Medicago truncatula
Medtr2g013950 5.0kb downstream 5.0kb downstream 5000 false chr2: 3840816-3845815 Medicago truncatula
Medtr2g013950 10.0kb upstream 10.0kb upstream 11085 true chr2: 3829731-3840815 Medicago truncatula
Medtr2g013950 10.0kb upstream 10.0kb upstream 10000 false chr2: 3829731-3839730 Medicago truncatula
Medtr2g013950 10.0kb downstream 10.0kb downstream 11085 true chr2: 3839731-3850815 Medicago truncatula
Medtr2g013950 10.0kb downstream 10.0kb downstream 10000 false chr2: 3840816-3850815 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.745     High High
cufflinks 28.137     High  
cufflinks 42.596     High  
cufflinks 39.117     High  
cufflinks 37.686     High  
cufflinks 12.899     High Low
cufflinks 21.078     High  
cufflinks 35.836     High  
cufflinks 24.268     High  

0 Strain