Gene : Medtr2g013440 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF05755 - Rubber elongation factor protein (REF) (REF) Description:  rubber elongation factor protein
Genomic Order:  540 Name:  ? Medtr2g013440
Secondary Identifier:  ? PAC:31066260
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013440 0.5kb upstream 0.5kb upstream 1886 true chr2: 3617525-3619410 Medicago truncatula
Medtr2g013440 0.5kb upstream 0.5kb upstream 500 false chr2: 3617525-3618024 Medicago truncatula
Medtr2g013440 0.5kb downstream 0.5kb downstream 1886 true chr2: 3618025-3619910 Medicago truncatula
Medtr2g013440 0.5kb downstream 0.5kb downstream 500 false chr2: 3619411-3619910 Medicago truncatula
Medtr2g013440 1.0kb upstream 1.0kb upstream 2386 true chr2: 3617025-3619410 Medicago truncatula
Medtr2g013440 1.0kb upstream 1.0kb upstream 1000 false chr2: 3617025-3618024 Medicago truncatula
Medtr2g013440 1.0kb downstream 1.0kb downstream 2386 true chr2: 3618025-3620410 Medicago truncatula
Medtr2g013440 1.0kb downstream 1.0kb downstream 1000 false chr2: 3619411-3620410 Medicago truncatula
Medtr2g013440 2.0kb upstream 2.0kb upstream 3386 true chr2: 3616025-3619410 Medicago truncatula
Medtr2g013440 2.0kb upstream 2.0kb upstream 2000 false chr2: 3616025-3618024 Medicago truncatula
Medtr2g013440 2.0kb downstream 2.0kb downstream 3386 true chr2: 3618025-3621410 Medicago truncatula
Medtr2g013440 2.0kb downstream 2.0kb downstream 2000 false chr2: 3619411-3621410 Medicago truncatula
Medtr2g013440 5.0kb upstream 5.0kb upstream 6386 true chr2: 3613025-3619410 Medicago truncatula
Medtr2g013440 5.0kb upstream 5.0kb upstream 5000 false chr2: 3613025-3618024 Medicago truncatula
Medtr2g013440 5.0kb downstream 5.0kb downstream 6386 true chr2: 3618025-3624410 Medicago truncatula
Medtr2g013440 5.0kb downstream 5.0kb downstream 5000 false chr2: 3619411-3624410 Medicago truncatula
Medtr2g013440 10.0kb upstream 10.0kb upstream 11386 true chr2: 3608025-3619410 Medicago truncatula
Medtr2g013440 10.0kb upstream 10.0kb upstream 10000 false chr2: 3608025-3618024 Medicago truncatula
Medtr2g013440 10.0kb downstream 10.0kb downstream 11386 true chr2: 3618025-3629410 Medicago truncatula
Medtr2g013440 10.0kb downstream 10.0kb downstream 10000 false chr2: 3619411-3629410 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314163 5265 Fabidae View MSA
124071747 5270 Rosid View MSA
123747287 5271 Pentapetalae View MSA
122790209 5272 Eudicot View MSA
122043264 5273 Angiosperm View MSA
121343982 5274 Embryophyte View MSA
123379951 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 457.539     High  
cufflinks 92.527     High  
cufflinks 73.626     High Low
cufflinks 731.893     High  
cufflinks 94.202     High  
cufflinks 1121.898     High High
cufflinks 424.187     High  
cufflinks 62.784     High Low
cufflinks 668.347     High  

0 Strain