Gene : Medtr2g014460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11468:SF3 - GLYCOGEN PHOSPHORYLASE Description:  glycogen/starch/alpha-glucan phosphorylase family protein
Genomic Order:  608 Name:  ? Medtr2g014460
Secondary Identifier:  ? PAC:31068161
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5941 Medicago truncatula pathologic  
Mtruncatula PWY-7238 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g014460 0.5kb upstream 0.5kb upstream 15062 true chr2: 4122601-4137662 Medicago truncatula
Medtr2g014460 0.5kb upstream 0.5kb upstream 500 false chr2: 4137163-4137662 Medicago truncatula
Medtr2g014460 0.5kb downstream 0.5kb downstream 15062 true chr2: 4122101-4137162 Medicago truncatula
Medtr2g014460 0.5kb downstream 0.5kb downstream 500 false chr2: 4122101-4122600 Medicago truncatula
Medtr2g014460 1.0kb upstream 1.0kb upstream 15562 true chr2: 4122601-4138162 Medicago truncatula
Medtr2g014460 1.0kb upstream 1.0kb upstream 1000 false chr2: 4137163-4138162 Medicago truncatula
Medtr2g014460 1.0kb downstream 1.0kb downstream 15562 true chr2: 4121601-4137162 Medicago truncatula
Medtr2g014460 1.0kb downstream 1.0kb downstream 1000 false chr2: 4121601-4122600 Medicago truncatula
Medtr2g014460 2.0kb upstream 2.0kb upstream 16562 true chr2: 4122601-4139162 Medicago truncatula
Medtr2g014460 2.0kb upstream 2.0kb upstream 2000 false chr2: 4137163-4139162 Medicago truncatula
Medtr2g014460 2.0kb downstream 2.0kb downstream 16562 true chr2: 4120601-4137162 Medicago truncatula
Medtr2g014460 2.0kb downstream 2.0kb downstream 2000 false chr2: 4120601-4122600 Medicago truncatula
Medtr2g014460 5.0kb upstream 5.0kb upstream 19562 true chr2: 4122601-4142162 Medicago truncatula
Medtr2g014460 5.0kb upstream 5.0kb upstream 5000 false chr2: 4137163-4142162 Medicago truncatula
Medtr2g014460 5.0kb downstream 5.0kb downstream 19562 true chr2: 4117601-4137162 Medicago truncatula
Medtr2g014460 5.0kb downstream 5.0kb downstream 5000 false chr2: 4117601-4122600 Medicago truncatula
Medtr2g014460 10.0kb upstream 10.0kb upstream 24562 true chr2: 4122601-4147162 Medicago truncatula
Medtr2g014460 10.0kb upstream 10.0kb upstream 10000 false chr2: 4137163-4147162 Medicago truncatula
Medtr2g014460 10.0kb downstream 10.0kb downstream 24562 true chr2: 4112601-4137162 Medicago truncatula
Medtr2g014460 10.0kb downstream 10.0kb downstream 10000 false chr2: 4112601-4122600 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302564 5265 Fabidae View MSA
124070356 5270 Rosid View MSA
123742386 5271 Pentapetalae View MSA
122770279 5272 Eudicot View MSA
122048524 5273 Angiosperm View MSA
121348195 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.966       High
cufflinks 1.112        
cufflinks 1.273        
cufflinks 0.192       Low
cufflinks 1.383        
cufflinks 0.239       Low
cufflinks 0.517        
cufflinks 1.212        
cufflinks 0.676        

0 Strain