Gene : Medtr2g014320 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15039:SF11 - DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN Description:  dolichol phosphate-mannose biosynthesis regulatory protein
Genomic Order:  597 Name:  ? Medtr2g014320
Secondary Identifier:  ? PAC:31063242
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g014320 0.5kb upstream 0.5kb upstream 3639 true chr2: 4052496-4056134 Medicago truncatula
Medtr2g014320 0.5kb upstream 0.5kb upstream 500 false chr2: 4055635-4056134 Medicago truncatula
Medtr2g014320 0.5kb downstream 0.5kb downstream 3639 true chr2: 4051996-4055634 Medicago truncatula
Medtr2g014320 0.5kb downstream 0.5kb downstream 500 false chr2: 4051996-4052495 Medicago truncatula
Medtr2g014320 1.0kb upstream 1.0kb upstream 4139 true chr2: 4052496-4056634 Medicago truncatula
Medtr2g014320 1.0kb upstream 1.0kb upstream 1000 false chr2: 4055635-4056634 Medicago truncatula
Medtr2g014320 1.0kb downstream 1.0kb downstream 4139 true chr2: 4051496-4055634 Medicago truncatula
Medtr2g014320 1.0kb downstream 1.0kb downstream 1000 false chr2: 4051496-4052495 Medicago truncatula
Medtr2g014320 2.0kb upstream 2.0kb upstream 5139 true chr2: 4052496-4057634 Medicago truncatula
Medtr2g014320 2.0kb upstream 2.0kb upstream 2000 false chr2: 4055635-4057634 Medicago truncatula
Medtr2g014320 2.0kb downstream 2.0kb downstream 5139 true chr2: 4050496-4055634 Medicago truncatula
Medtr2g014320 2.0kb downstream 2.0kb downstream 2000 false chr2: 4050496-4052495 Medicago truncatula
Medtr2g014320 5.0kb upstream 5.0kb upstream 8139 true chr2: 4052496-4060634 Medicago truncatula
Medtr2g014320 5.0kb upstream 5.0kb upstream 5000 false chr2: 4055635-4060634 Medicago truncatula
Medtr2g014320 5.0kb downstream 5.0kb downstream 8139 true chr2: 4047496-4055634 Medicago truncatula
Medtr2g014320 5.0kb downstream 5.0kb downstream 5000 false chr2: 4047496-4052495 Medicago truncatula
Medtr2g014320 10.0kb upstream 10.0kb upstream 13139 true chr2: 4052496-4065634 Medicago truncatula
Medtr2g014320 10.0kb upstream 10.0kb upstream 10000 false chr2: 4055635-4065634 Medicago truncatula
Medtr2g014320 10.0kb downstream 10.0kb downstream 13139 true chr2: 4042496-4055634 Medicago truncatula
Medtr2g014320 10.0kb downstream 10.0kb downstream 10000 false chr2: 4042496-4052495 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122257713 5265 Fabidae Singleton cluster - no MSA
124071671 5270 Rosid View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.479        
cufflinks 1.695        
cufflinks 1.39        
cufflinks 4.445       High
cufflinks 1.612        
cufflinks 6.823       High
cufflinks 1.787        
cufflinks 1.23        
cufflinks 3.061        

0 Strain