Gene : Medtr1g116947 M. truncatula Mt4.0v1
Defline:  (1 of 43) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Description:  pollen protein Ole E I-like protein
Genomic Order:  6685 Name:  ? Medtr1g116947
Secondary Identifier:  ? PAC:31098752
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116947 0.5kb upstream 0.5kb upstream 5356 true chr1: 52817506-52822861 Medicago truncatula
Medtr1g116947 0.5kb upstream 0.5kb upstream 500 false chr1: 52822362-52822861 Medicago truncatula
Medtr1g116947 0.5kb downstream 0.5kb downstream 5356 true chr1: 52817006-52822361 Medicago truncatula
Medtr1g116947 0.5kb downstream 0.5kb downstream 500 false chr1: 52817006-52817505 Medicago truncatula
Medtr1g116947 1.0kb upstream 1.0kb upstream 5856 true chr1: 52817506-52823361 Medicago truncatula
Medtr1g116947 1.0kb upstream 1.0kb upstream 1000 false chr1: 52822362-52823361 Medicago truncatula
Medtr1g116947 1.0kb downstream 1.0kb downstream 5856 true chr1: 52816506-52822361 Medicago truncatula
Medtr1g116947 1.0kb downstream 1.0kb downstream 1000 false chr1: 52816506-52817505 Medicago truncatula
Medtr1g116947 2.0kb upstream 2.0kb upstream 6856 true chr1: 52817506-52824361 Medicago truncatula
Medtr1g116947 2.0kb upstream 2.0kb upstream 2000 false chr1: 52822362-52824361 Medicago truncatula
Medtr1g116947 2.0kb downstream 2.0kb downstream 6856 true chr1: 52815506-52822361 Medicago truncatula
Medtr1g116947 2.0kb downstream 2.0kb downstream 2000 false chr1: 52815506-52817505 Medicago truncatula
Medtr1g116947 5.0kb upstream 5.0kb upstream 9856 true chr1: 52817506-52827361 Medicago truncatula
Medtr1g116947 5.0kb upstream 5.0kb upstream 5000 false chr1: 52822362-52827361 Medicago truncatula
Medtr1g116947 5.0kb downstream 5.0kb downstream 9856 true chr1: 52812506-52822361 Medicago truncatula
Medtr1g116947 5.0kb downstream 5.0kb downstream 5000 false chr1: 52812506-52817505 Medicago truncatula
Medtr1g116947 10.0kb upstream 10.0kb upstream 14856 true chr1: 52817506-52832361 Medicago truncatula
Medtr1g116947 10.0kb upstream 10.0kb upstream 10000 false chr1: 52822362-52832361 Medicago truncatula
Medtr1g116947 10.0kb downstream 10.0kb downstream 14856 true chr1: 52807506-52822361 Medicago truncatula
Medtr1g116947 10.0kb downstream 10.0kb downstream 10000 false chr1: 52807506-52817505 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298648 5265 Fabidae View MSA
124072659 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 137.876     High  
cufflinks 62.379     High  
cufflinks 48.911     High Low
cufflinks 422.708     High High
cufflinks 61.906     High  
cufflinks 152.467     High  
cufflinks 365.167     High High
cufflinks 47.929     High Low
cufflinks 512.214     High High

0 Strain