Gene : Medtr1g117010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Description:  peptidyl-prolyl cis-trans isomerase
Genomic Order:  6696 Name:  ? Medtr1g117010
Secondary Identifier:  ? PAC:31099873
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g117010 0.5kb upstream 0.5kb upstream 13018 true chr1: 52934517-52947534 Medicago truncatula
Medtr1g117010 0.5kb upstream 0.5kb upstream 500 false chr1: 52947035-52947534 Medicago truncatula
Medtr1g117010 0.5kb downstream 0.5kb downstream 13018 true chr1: 52934017-52947034 Medicago truncatula
Medtr1g117010 0.5kb downstream 0.5kb downstream 500 false chr1: 52934017-52934516 Medicago truncatula
Medtr1g117010 1.0kb upstream 1.0kb upstream 13518 true chr1: 52934517-52948034 Medicago truncatula
Medtr1g117010 1.0kb upstream 1.0kb upstream 1000 false chr1: 52947035-52948034 Medicago truncatula
Medtr1g117010 1.0kb downstream 1.0kb downstream 13518 true chr1: 52933517-52947034 Medicago truncatula
Medtr1g117010 1.0kb downstream 1.0kb downstream 1000 false chr1: 52933517-52934516 Medicago truncatula
Medtr1g117010 2.0kb upstream 2.0kb upstream 14518 true chr1: 52934517-52949034 Medicago truncatula
Medtr1g117010 2.0kb upstream 2.0kb upstream 2000 false chr1: 52947035-52949034 Medicago truncatula
Medtr1g117010 2.0kb downstream 2.0kb downstream 14518 true chr1: 52932517-52947034 Medicago truncatula
Medtr1g117010 2.0kb downstream 2.0kb downstream 2000 false chr1: 52932517-52934516 Medicago truncatula
Medtr1g117010 5.0kb upstream 5.0kb upstream 17518 true chr1: 52934517-52952034 Medicago truncatula
Medtr1g117010 5.0kb upstream 5.0kb upstream 5000 false chr1: 52947035-52952034 Medicago truncatula
Medtr1g117010 5.0kb downstream 5.0kb downstream 17518 true chr1: 52929517-52947034 Medicago truncatula
Medtr1g117010 5.0kb downstream 5.0kb downstream 5000 false chr1: 52929517-52934516 Medicago truncatula
Medtr1g117010 10.0kb upstream 10.0kb upstream 22518 true chr1: 52934517-52957034 Medicago truncatula
Medtr1g117010 10.0kb upstream 10.0kb upstream 10000 false chr1: 52947035-52957034 Medicago truncatula
Medtr1g117010 10.0kb downstream 10.0kb downstream 22518 true chr1: 52924517-52947034 Medicago truncatula
Medtr1g117010 10.0kb downstream 10.0kb downstream 10000 false chr1: 52924517-52934516 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309632 5265 Fabidae View MSA
124069155 5270 Rosid View MSA
123741646 5271 Pentapetalae View MSA
122794502 5272 Eudicot View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.27        
cufflinks 1.903        
cufflinks 1.651        
cufflinks 0.49        
cufflinks 2.547       High
cufflinks 0.183       Low
cufflinks 0.315        
cufflinks 1.972       High
cufflinks 0.292        

0 Strain