Gene : Medtr1g492590 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.1.3.64 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase Description:  myotubularin-like phosphatase II-like protein
Genomic Order:  5131 Name:  ? Medtr1g492590
Secondary Identifier:  ? PAC:31095128
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6367 Medicago truncatula pathologic  
Mtruncatula PWY-6368 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g492590 0.5kb upstream 0.5kb upstream 5781 true chr1: 41492386-41498166 Medicago truncatula
Medtr1g492590 0.5kb upstream 0.5kb upstream 500 false chr1: 41492386-41492885 Medicago truncatula
Medtr1g492590 0.5kb downstream 0.5kb downstream 5781 true chr1: 41492886-41498666 Medicago truncatula
Medtr1g492590 0.5kb downstream 0.5kb downstream 500 false chr1: 41498167-41498666 Medicago truncatula
Medtr1g492590 1.0kb upstream 1.0kb upstream 6281 true chr1: 41491886-41498166 Medicago truncatula
Medtr1g492590 1.0kb upstream 1.0kb upstream 1000 false chr1: 41491886-41492885 Medicago truncatula
Medtr1g492590 1.0kb downstream 1.0kb downstream 6281 true chr1: 41492886-41499166 Medicago truncatula
Medtr1g492590 1.0kb downstream 1.0kb downstream 1000 false chr1: 41498167-41499166 Medicago truncatula
Medtr1g492590 2.0kb upstream 2.0kb upstream 7281 true chr1: 41490886-41498166 Medicago truncatula
Medtr1g492590 2.0kb upstream 2.0kb upstream 2000 false chr1: 41490886-41492885 Medicago truncatula
Medtr1g492590 2.0kb downstream 2.0kb downstream 7281 true chr1: 41492886-41500166 Medicago truncatula
Medtr1g492590 2.0kb downstream 2.0kb downstream 2000 false chr1: 41498167-41500166 Medicago truncatula
Medtr1g492590 5.0kb upstream 5.0kb upstream 10281 true chr1: 41487886-41498166 Medicago truncatula
Medtr1g492590 5.0kb upstream 5.0kb upstream 5000 false chr1: 41487886-41492885 Medicago truncatula
Medtr1g492590 5.0kb downstream 5.0kb downstream 10281 true chr1: 41492886-41503166 Medicago truncatula
Medtr1g492590 5.0kb downstream 5.0kb downstream 5000 false chr1: 41498167-41503166 Medicago truncatula
Medtr1g492590 10.0kb upstream 10.0kb upstream 15281 true chr1: 41482886-41498166 Medicago truncatula
Medtr1g492590 10.0kb upstream 10.0kb upstream 10000 false chr1: 41482886-41492885 Medicago truncatula
Medtr1g492590 10.0kb downstream 10.0kb downstream 15281 true chr1: 41492886-41508166 Medicago truncatula
Medtr1g492590 10.0kb downstream 10.0kb downstream 10000 false chr1: 41498167-41508166 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122256107 5265 Fabidae Singleton cluster - no MSA
123997748 5270 Rosid Singleton cluster - no MSA
123744322 5271 Pentapetalae View MSA
122796754 5272 Eudicot View MSA
122047455 5273 Angiosperm View MSA
121350859 5274 Embryophyte View MSA
123381910 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.415       High
cufflinks 2.676        
cufflinks 3.441        
cufflinks 2.019        
cufflinks 3.033        
cufflinks 1.29       Low
cufflinks 4.123        
cufflinks 3.067        
cufflinks 3.045        

0 Strain